knowledgesystems cmo-pipelines issues

knowledgesystems / cmo-pipelines

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fix wrong column index bux in oncokb-annotator

#1193 sheridancbio closed 2 weeks ago
0
Sophia bug

#1192 callachennault closed 3 weeks ago
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fix slack messaging in cache clearing script

#1191 sheridancbio closed 1 month ago
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Update import-msk-extract-projects.sh

#1190 sheridancbio closed 1 month ago
1
Redcap hack

#1189 callachennault closed 1 month ago
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Support for MSK Extract Projects import

#1188 n1zea144 closed 1 month ago
0
Redcaphack

#1187 callachennault closed 1 month ago
1
Fix logic bug in CVR seq date backfill

#1186 jamesqo closed 1 month ago
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Add python3 validation utils

#1185 callachennault closed 3 weeks ago
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NCI Data Release - TCGA & CPTAC

#1184 averyniceday opened 2 months ago
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Fix CVR Requeue step-- Java 21 serialization

#1183 jamesqo closed 2 months ago
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Update README.md

#1182 sheridancbio closed 1 month ago
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java 21 rollout script changes

#1181 sheridancbio closed 2 months ago
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Reapply changes from PR #1134

#1180 sheridancbio closed 2 months ago
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Script changes already deployed into production

#1179 sheridancbio closed 2 months ago
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Handle < and > in age at seq

#1178 callachennault opened 2 months ago
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CT Support

#1177 averyniceday closed 1 month ago
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disable bugged cvr requeue step for rollout

#1176 sheridancbio closed 2 months ago
1
Determine how many lines to skip at beginning of file

#1175 callachennault closed 3 months ago
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Open port 4200 for curation server on aws

#1174 rmadupuri closed 1 month ago
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Test/Deploy CDM DAG to Dev & Prod

#1173 averyniceday opened 3 months ago
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Deploy Airflow to Prod

#1172 averyniceday opened 3 months ago
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Allow Seed Database Scripts To Run From cBioPortal Core

#1171 jamesqo opened 3 months ago
1
HCMI Cohorts Imported

#1170 averyniceday opened 3 months ago
0
HCMI TODO: Determine Clinical Attributes to Pull

#1169 averyniceday opened 3 months ago
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HCMI TODO: Disease Filter

#1168 averyniceday opened 3 months ago
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HCMI Documentation

#1167 averyniceday opened 3 months ago
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BEATAML TODO: Determine Clinical Attributes to Pull

#1166 averyniceday closed 2 months ago
0
DNS Entry/Ingress Adjustment for NCI Portal

#1165 averyniceday closed 3 months ago
0
Keycloak Setup for NCI Portal (Google Login)

#1164 averyniceday closed 3 months ago
0
Deploy NCI Portal in V2 Account

#1163 averyniceday opened 3 months ago
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Build NCI Portal Importer

#1162 averyniceday closed 3 months ago
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Deploy RDS Node for NCI Portal in V2 Account

#1161 averyniceday closed 3 months ago
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DNS Entry Adjustment for NCI Portal

#1160 averyniceday opened 3 months ago
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CCLE Integration

#1159 jamesqo closed 4 months ago
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CCLE Data Imported

#1158 jamesqo opened 4 months ago
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CCLE Data Generation

#1157 jamesqo opened 4 months ago
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Investigate Genome Nexus Annotation Failures for CCLE

#1156 jamesqo opened 4 months ago
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Convert RMA to RNA Expression Data for CCLE

#1155 jamesqo closed 3 months ago
0
NCI Portal Setup

#1154 averyniceday opened 4 months ago
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BEATAML TODO: Disease Filter

#1153 averyniceday closed 3 months ago
0
BEATAML Fetcher Support

#1152 averyniceday closed 3 months ago
0
BEATAML Documentation

#1151 averyniceday opened 4 months ago
0
BEATAML Cohorts Imported

#1150 averyniceday opened 4 months ago
0
HCMI Integration

#1149 averyniceday opened 4 months ago
0
HTAN Integration

#1148 averyniceday closed 3 months ago
0
BEATAML Integration

#1147 averyniceday opened 4 months ago
0
remove importer calls to --update-group

#1146 sheridancbio closed 4 months ago
0
Test Full Run of Sample List/S3 Support

#1145 averyniceday closed 2 months ago
0
Setup S3 Pull/Push in CDM DAGs

#1144 averyniceday closed 4 months ago
1