ku-cbd PhageBoost issues

ku-cbd / PhageBoost

Rapid discovery of novel prophages using biological feature engineering and machine learning

GNU General Public License v3.0

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issues

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test example failed

#32 igortru opened 6 months ago
1
Python error after installation

#31 shaman-narayanasamy opened 11 months ago
12
error about install

#30 liucong0429 opened 1 year ago
0
--version fails with python3.7.17

#29 jowodo opened 1 year ago
0
Unable to run PhageBoost with multiple threads

#28 praveenkant5 opened 1 year ago
0
Option description

#27 YuyaKiguchi opened 1 year ago
1
How can I get the genomes of 54 prokaryotes test data?

#26 lijzijie opened 1 year ago
0
AttributeError: 'ProteinAnalysis' object has no attribute 'molar_extinction_coefficient'

#25 SamuelGreenrod opened 2 years ago
1
Possible Issue with XGBoost?

#24 btemperton opened 2 years ago
1
AttributeError: module 'pyrodigal' has no attribute 'Pyrodigal'

#23 btemperton opened 2 years ago
3
Specifying a translation table

#22 TsumaR opened 2 years ago
0
Adding mask=True parameter to Pyrodigal to prevent unknown genes 'X' …

#21 linda5mith opened 2 years ago
0
KeyError: 'X'

#20 linda5mith opened 2 years ago
2
AttributeError: symbol not found

#19 tomdstanton opened 2 years ago
1
KeyError: 'X' when processing test data

#18 lowel0 closed 3 years ago
9
compatibility issue of xgboost model

#17 ccrinconc closed 2 years ago
6
Pass in custom gene model

#16 chartl-rancho opened 3 years ago
0
Failure at read_model_from_file

#15 chartl-rancho closed 3 years ago
1
Possible bug in calc_features.py

#14 chg60 closed 3 years ago
1
malloc(): memory corruption

#13 Sebastien-Raguideau opened 4 years ago
2
Metagenomic option

#12 sxh1136 closed 4 years ago
3
version

#11 linsalrob closed 4 years ago
2
Installation issue on Mac systems due to xgboos from pip

#10 meren closed 4 years ago
1
minor updates to installation instructions

#9 meren closed 4 years ago
0
update branch

#8 kkpsiren closed 4 years ago
0
phage fasta file names to unique names

#7 kkpsiren opened 4 years ago
0
PhageBoost to bioconda

#6 kkpsiren opened 4 years ago
0
PhageBoost to Python Package Index

#5 kkpsiren opened 4 years ago
0
better way to parse the regions

#4 kkpsiren opened 4 years ago
1
parse regions

#3 kkpsiren opened 4 years ago
0
add better -h flag than current

#2 kkpsiren opened 4 years ago
1
make feats faster

#1 kkpsiren opened 4 years ago
0