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lasigeBioTM
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MER
Minimal Named-Entity Recognizer (MER)
http://labs.fc.ul.pt/mer/
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The awk script does not work on Mac OS but works on Linux
#40
dpavot
opened
4 years ago
1
merge master with dev
#39
fjmc
closed
7 years ago
0
Terms with punctuation
#38
AndreLamurias
closed
5 years ago
3
awk error when annotating text with newlines
#37
LLCampos
closed
7 years ago
3
test pull request
#36
LLCampos
closed
7 years ago
0
Non-consistent behaviour "nicotinic acid"
#35
LLCampos
closed
7 years ago
0
MER should work with all the most used awk interpreters?
#34
LLCampos
opened
7 years ago
0
Wrong matching when period (.) is part of term
#33
LLCampos
closed
7 years ago
1
Matching term not existent in gazeeter
#32
LLCampos
opened
7 years ago
0
Incorrect field init (negative) in annotation
#31
AndreLamurias
closed
7 years ago
2
Duplicated entities
#30
AndreLamurias
closed
7 years ago
0
Genes file too big
#29
LLCampos
closed
7 years ago
1
get_entities should match whole words only
#28
LLCampos
closed
7 years ago
4
List with entities repeated across vocabularies
#27
AndreLamurias
closed
7 years ago
4
BeCalm Error when no entities are found
#26
AndreLamurias
closed
7 years ago
2
Number of predictions drops for large requests
#25
AndreLamurias
closed
7 years ago
2
Duplicate annotation when "—" is part of term
#24
LLCampos
closed
7 years ago
1
get_entities should choose entity type according to the source used
#23
AndreLamurias
closed
7 years ago
2
There should be an option to do batch requests to external services
#22
LLCampos
closed
7 years ago
3
Entrez Direct bash library depends on Perl
#21
LLCampos
closed
7 years ago
0
Isn't there something wrong with the scores?
#20
LLCampos
closed
7 years ago
2
Unicode characters in vocabularies don't match unicode characters in text
#19
LLCampos
closed
7 years ago
9
Annotation offsets should be character offsets, not byte offsets
#18
LLCampos
closed
7 years ago
1
Special characters are replaced by full stops in the output
#17
LLCampos
closed
7 years ago
0
Should annotate words between parenthesis
#16
LLCampos
closed
7 years ago
1
Unicode Character 'EM SPACE' causes problems on annotations indexes
#15
LLCampos
closed
7 years ago
1
Index when "\xb5" and other symbol present in text to annotate.
#14
LLCampos
closed
7 years ago
0
Missing annotation when word precedes a comma
#13
LLCampos
closed
7 years ago
0
Wrong index when more than one white space between words
#12
LLCampos
closed
7 years ago
1
Wrong indexes
#11
LLCampos
closed
7 years ago
1
Problem with the way get_entities.sh gets matches indexes
#10
LLCampos
closed
7 years ago
3
Different annotations in same document cannot overlap each other
#9
LLCampos
closed
7 years ago
1
get_entities.sh: line 60: /usr/bin/egrep: Argument list too long
#8
LLCampos
closed
7 years ago
1
get_entities.sh should return nothing when does not find annotations
#7
LLCampos
closed
7 years ago
0
Create script that evaluates IBELight against the BeCalm training corpus
#6
LLCampos
closed
7 years ago
1
Change output to BeCalm TSV format
#5
LLCampos
closed
7 years ago
1
IBELight does not annotate entities that include words with less than three characters
#4
LLCampos
closed
7 years ago
1
IBELight does not recognize terms with more than 2 words
#3
LLCampos
closed
7 years ago
1
Full stops should be ignored
#2
LLCampos
closed
7 years ago
1
Second piped_pair_text has extra word
#1
LLCampos
closed
7 years ago
1