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leekgroup
/
recount
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
https://jhubiostatistics.shinyapps.io/recount/
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package ‘recount’ is not available for Bioconductor version '3.19'
#25
twobeers75
closed
6 months ago
5
The makeTxDb*() functions have moved from GenomicFeatures to txdbmaker
#24
hpages
closed
8 months ago
3
expressed_regions() is not working with the new IDIES and AWS bigWig file locations
#23
lcolladotor
opened
1 year ago
5
[BUG] Severe Slowdown due to rowRanges 'symbol' column in RSE datasets
#22
millerh1
closed
3 years ago
2
Results for TCGA samples having all "NA" values
#21
boseb
closed
3 years ago
1
rse_gene/rse_exon have too many counts by several orders of magnitude?
#20
ceiabreu
closed
4 years ago
1
inconsistent pheno tables between gene and transcript datasets
#19
jvanheld
closed
4 years ago
1
NA's in rse_tx_brain
#18
sonali-bioc
closed
4 years ago
3
How to get annotation for exon?
#17
ahdee
closed
4 years ago
1
Download rse for a tissue from GTEx/TCGA
#16
lcolladotor
closed
4 years ago
1
Helper function for loading multiple rse files
#15
lcolladotor
closed
3 years ago
1
Remove package installation code
#14
LiNk-NY
closed
5 years ago
3
Is additional normalization needed when compare counts between two different projects, like TCGA and GTEx?
#13
xiaodongpang23
closed
5 years ago
1
BiocFileCache integration
#12
PeteHaitch
closed
6 years ago
2
Search by GSE
#11
assaron
closed
3 years ago
5
column names of colData of RangedSummarizedExperiment inconsistent?
#10
mbernste
closed
7 years ago
3
Plot base level coverage
#9
lcolladotor
closed
7 years ago
9
TCGA metadata issue in column age_at_initial_pathologic_diagnosis
#8
lcolladotor
closed
7 years ago
2
Transcript level matrix for thousands of experiments
#7
lcolladotor
closed
7 years ago
1
POU5F1 and genes on more than one chromosome are currently not in recount
#6
lcolladotor
closed
7 years ago
1
snaptron_query NA coercion error
#5
jpling
closed
7 years ago
3
Transcript level matrix for thousands of experiments
#4
amadeusX
closed
7 years ago
1
Unable to access data set to reproduce analysis
#3
ishaanpbs
closed
7 years ago
1
Issue downloading the recount package with my version of R
#2
julclu
closed
8 years ago
2
needs to import stuff from `SummarizedExperiment`?
#1
andrewejaffe
closed
8 years ago
1