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lhatsk
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AlphaLink
AlphaLink: Integrating crosslinking MS data into OpenFold
Apache License 2.0
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inference without MSA
#25
sehooni
opened
2 months ago
7
integration of AlphaLink into AlphaFold3
#24
Suparat-Scheu
opened
3 months ago
1
Installation unclear
#23
james-vincent
opened
9 months ago
1
Alphalink install failed
#22
jIskCoder
opened
10 months ago
3
Running "predict_with_crosslinks.py" with "restraints.csv --distograms" gives the error
#21
BelyaevaJuly
closed
10 months ago
6
Run "python preprocessing_distributions.py --infile restraints.csv" but get an error
#20
chenx469
closed
10 months ago
4
Inter-subunit crosslinking data
#19
Samuel-gwb
closed
11 months ago
2
Problem with Crosslinking data input
#18
Li-dacheng
opened
1 year ago
12
Request for training
#17
sehooni
opened
1 year ago
5
Request for an example folder
#16
wtq18
opened
1 year ago
1
No MSA output - precomputed alignments called automatically
#15
ciancone94
closed
11 months ago
3
CUDA stub file missing for cpu-only build
#14
jgoodson
closed
11 months ago
1
problem with model loading
#13
SimpleNumber
opened
1 year ago
12
Wrong array shape when using single crosslink record
#12
georgkempf
closed
1 year ago
1
Over-weight of crosslinking data
#11
Yan-Yan-2020
opened
1 year ago
4
clarify preprocessing
#10
grandrea
closed
1 year ago
0
hands-on protocol for contacts_to_distograms
#9
Yan-Yan-2020
opened
1 year ago
34
rename venv, fix matplotlib version
#8
grandrea
closed
1 year ago
0
Save pkl files
#7
jurut
closed
1 year ago
1
Issue with multimer
#6
samuelmurail
closed
1 year ago
3
Fixes to allow docker build
#5
samuelmurail
closed
1 year ago
1
FDR Description in Arg parse is potentially wrong
#4
smturzo
closed
1 year ago
3
crosslinks need to be provided as comma separated, not space
#3
gieses
closed
1 year ago
1
preprocessing for distance distributions for other restraint types.
#2
grandrea
closed
1 year ago
0
Documentation ag
#1
grandrea
closed
1 year ago
0