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lianos
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sparrow
Take command of your set enrichment analyses.
https://lianos.github.io/sparrow/
MIT License
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test: fix tests for 'scoreSingleSamples'
#19
gladkia
closed
1 month ago
1
Assertion on contrast failed
#18
RussBainer
opened
1 year ago
1
Assertion on 'contrast' failed
#17
RussBainer
opened
1 year ago
0
Ensure support for new mouse MSigDB collections
#16
lianos
opened
1 year ago
0
seas fails when passing inputs to `ora`, & `fgsea`
#15
RussBainer
closed
2 years ago
2
Add t and z stats to edgeR/qlf results from calculateIndividualLogFC
#14
lianos
opened
2 years ago
0
Introduce max cex cor
#13
gladkia
closed
2 years ago
2
fix: get rid of warnings in `sparrow::corplot`
#12
gladkia
closed
2 years ago
3
make `sparrow::corplot` returning `E` instead of `invisible(NULL)`
#11
gladkia
closed
2 years ago
1
Tweaks for initial bioc submission
#10
lianos
closed
2 years ago
0
geneSetURL functions can now be pointers to functions
#9
lianos
closed
3 years ago
0
Reorders parameters in seas() function to put the feature container first.
#8
lianos
closed
3 years ago
0
Makes GeneSetDb constructor a bit more s3 sane.
#7
lianos
closed
3 years ago
0
Reorder paramters in scoreSingleSamples to put `x` first
#6
lianos
opened
3 years ago
0
Reorder parameters in seas() to put `x` first.
#5
lianos
closed
3 years ago
2
Wire up the seas select_by, group_by, biased_by parameters to correct downstream mojo
#4
lianos
opened
3 years ago
0
Create a renameCollection function
#3
lianos
closed
3 years ago
0
Use babelgene package to re-implement convertIdentifiers()
#2
lianos
opened
3 years ago
0
Uses msigdbr packages instead of msigdb.data
#1
lianos
closed
3 years ago
0