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lmb-embrapa
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machado
This repository provides users with a framework to store, search and visualize biological data.
GNU General Public License v3.0
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Dependabot alerts #14
#365
azneto
closed
1 month ago
0
Dependabot security alert
#364
azneto
closed
2 months ago
0
replace contained with located in the python script
#363
mthang
closed
10 months ago
0
load_fasta failed
#362
mthang
closed
10 months ago
22
load_rnaseq_data.py
#361
mmudado
closed
1 year ago
0
improves error messages
#360
azneto
closed
1 year ago
0
implements the functions check_ids and retrieve_cvterm
#359
azneto
closed
1 year ago
0
minor improvements
#358
azneto
closed
1 year ago
0
creates correspondent protein record for C_gene_segment and V_gene_segment sequence types
#357
azneto
closed
1 year ago
0
jbrowser path and reference files
#356
Aciole-David
closed
1 year ago
11
Configuração pagina inicial
#355
gledisonteixeira
closed
1 year ago
12
minor fix to run on postgresql 14 and above
#354
azneto
closed
1 year ago
0
Set tests to run using github actions and updates docs
#353
azneto
closed
1 year ago
0
bump dependencies versions, updates docs, minor fixes to enable using the same feature uniquename for different organismss, and updates the sample.tar.gz file
#352
azneto
closed
1 year ago
1
New tests for data loading commands
#351
azneto
closed
1 year ago
1
Error step 20/36
#350
gledisonteixeira
closed
1 year ago
3
adds new sample files for the commands load_similarity_matches and load_similarity
#349
azneto
closed
1 year ago
1
adds new sample files for the commands load_publication, load_feature…
#348
azneto
closed
1 year ago
1
Support identical feature names in different organisms
#347
njbooher
closed
1 year ago
9
Speed up JBrowse RefSeqs endpoint
#346
njbooher
closed
2 years ago
3
RefSeqs JBrowse route is unusably slow with a large number of sequences
#345
njbooher
closed
2 years ago
1
Error when attempting to load features with the same name for different organisms
#344
njbooher
closed
1 year ago
5
new tests for travis CI
#343
azneto
closed
2 years ago
1
Update to django 3.2.14
#342
njbooher
closed
2 years ago
2
updates docs to use elasticsearch 7
#341
azneto
closed
2 years ago
1
updates django and includes django-haystack to the dependencies
#340
azneto
closed
2 years ago
1
Bump django from 3.2.12 to 3.2.13
#339
dependabot[bot]
closed
2 years ago
1
minor changes to improve sonarcloud score
#338
azneto
closed
2 years ago
1
minor changes to improve sonarcloud score
#337
azneto
closed
2 years ago
2
Allows to add DOI to feature_properties and make DOI searcheable by elasticsearch
#336
azneto
closed
2 years ago
2
Registering all models in admin.py
#335
swrosati
closed
2 years ago
7
Bump django from 3.2.10 to 3.2.12
#334
dependabot[bot]
closed
2 years ago
2
Issue while loading data into the database
#333
guff95
closed
2 years ago
13
configures API endpoints to cache results, updates dependencies versions, and updates travis for ubuntu focal
#332
azneto
closed
2 years ago
2
upgrade django-haystack to run elasticsearch 7
#331
azneto
closed
2 years ago
1
set which overlapping features will be indexed in the settings.py
#330
azneto
opened
2 years ago
0
Upgrade django to 3.2
#329
njbooher
closed
2 years ago
1
Jbrowse Can't load ref Seq
#328
wjwei-handsome
closed
2 years ago
13
Handle weird xrefs during loading
#327
njbooher
closed
3 years ago
1
Erro ao baixar Jbrowse Machado-docker
#326
gledisonteixeira
closed
3 years ago
7
Jbrowse use featureloc
#325
njbooher
closed
3 years ago
10
minor fixes to display empty rather than None
#324
azneto
closed
3 years ago
1
Infraspecific name
#323
njbooher
closed
3 years ago
1
updates the Django version and changes the operator to ~= in order to allow compatible versions
#322
azneto
closed
3 years ago
1
Dependency version pinning
#321
njbooher
closed
3 years ago
2
Call init properly
#320
njbooher
closed
3 years ago
2
updates to handle CNV
#319
azneto
closed
3 years ago
1
Indexing improvement
#318
njbooher
closed
3 years ago
2
feature page: loads expression data from the API and renders in a dynamic table
#317
azneto
closed
3 years ago
0
updates searches to Raw
#316
azneto
closed
3 years ago
0
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