issues
search
manuel-munoz-aguirre
/
PyHIST
A pipeline to segment tissue from the background in histological images
GNU General Public License v3.0
56
stars
13
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Performance changes
#32
ajinkya-kulkarni
opened
1 year ago
0
is there any way to run the code without down-sample at level 0?
#31
coregroup6
opened
2 years ago
0
normalization
#30
swvanderlaan
opened
2 years ago
1
Segment
#29
swvanderlaan
opened
2 years ago
7
reduce docker image size by almost half
#28
kaczmarj
opened
2 years ago
1
PyHIST hard dependency on pixman version 0.36.0
#27
juanfranciscomorales
closed
2 years ago
2
Padded tiles
#26
franfcunha
closed
2 years ago
2
Out put much clear patches
#25
duernaT
closed
3 years ago
10
CRITICAL ERROR: Please compile the segmentation algorithm before running this script.
#24
MohammedHAlali
closed
3 years ago
3
Downsampling
#23
karray
closed
3 years ago
6
Tile coordinates
#22
gabemarx
opened
3 years ago
3
Parameter recommendations for immunohistochemical stained WSI
#21
gabemarx
closed
3 years ago
6
Support for find the whole-slide image (WSI) resolution (in microns per pixel, MPP) and extracting tiles with given MPP resolution
#20
nodp53
opened
3 years ago
3
Support for tumor segmentation
#19
jmayank23
opened
3 years ago
2
Test downsample factor should be updated in the tutorial
#18
manuel-munoz-aguirre
closed
4 years ago
1
PyHist docker version is not working
#17
Sadegh-Saberian
closed
4 years ago
6
Exhausted resources on Docker container
#16
manuel-munoz-aguirre
closed
4 years ago
0
Portability for imagemagick
#15
manuel-munoz-aguirre
closed
4 years ago
0
Step takes too much memory
#14
manuel-munoz-aguirre
closed
4 years ago
1
Push docker image when all is ready
#13
manuel-munoz-aguirre
closed
4 years ago
0
Write python check to see if segment is compiled
#12
manuel-munoz-aguirre
closed
5 years ago
0
Paths broken
#11
manuel-munoz-aguirre
closed
5 years ago
0
Cannot create output directory
#10
manuel-munoz-aguirre
closed
5 years ago
0
Check for valid parameters
#9
manuel-munoz-aguirre
closed
5 years ago
0
Add examples to README.md
#8
manuel-munoz-aguirre
closed
5 years ago
0
Test pipeline on different datasets
#7
manuel-munoz-aguirre
closed
5 years ago
0
This link is invalid
#6
manuel-munoz-aguirre
closed
5 years ago
0
Portability
#5
manuel-munoz-aguirre
closed
5 years ago
1
Script is executable but needs "bash" to run
#4
manuel-munoz-aguirre
closed
5 years ago
0
Provide files already unzipped
#3
manuel-munoz-aguirre
closed
5 years ago
1
Document what each argument does
#2
manuel-munoz-aguirre
closed
5 years ago
0
Unsafe start of bash script
#1
manuel-munoz-aguirre
closed
5 years ago
0