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martinjzhang
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scDRS
Single-cell disease relevance score (scDRS)
https://martinjzhang.github.io/scDRS/
MIT License
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concerning beta or OR when choosing putative disease genes
#42
parkjooyoung99
opened
1 year ago
1
check input in munge-gs
#41
KangchengHou
closed
1 year ago
0
munge-gs type error
#40
parkjooyoung99
closed
1 year ago
2
Negative weights in munge-gs
#39
martinjzhang
opened
1 year ago
0
Issues with generating gs files
#38
Li-mengjie
closed
1 year ago
1
Problem with munging
#37
HJ234
closed
1 year ago
6
Adding arguments of min_cells and min_genes to CLI for data filtering
#36
martinjzhang
closed
1 year ago
1
Issue32
#35
martinjzhang
closed
1 year ago
1
Print cell type info
#34
martinjzhang
closed
1 year ago
0
Segmentation fault when Running scDRS
#33
angelussong
closed
1 year ago
4
Data sparsity is a critical problem for the inference stability (ex. 10x data)
#32
yyoshiaki
closed
1 year ago
11
scDRS CLI scdrs munge-gs
#31
Alina-Song
closed
1 year ago
1
Broader control gene sets
#30
kitscorp
opened
1 year ago
1
Problems with input data
#29
Mia1037
closed
1 year ago
6
doc v1.0.2
#28
martinjzhang
closed
1 year ago
0
Drop duplicates for pval_file and zsc_file
#27
martinjzhang
closed
1 year ago
0
Check inputs
#26
martinjzhang
closed
1 year ago
0
Loess error in compute-score after subsampling
#25
twoneu
closed
1 year ago
5
KeyError: at plot_group_stats step
#24
twoneu
closed
1 year ago
12
scDRS breaks if using all scRNA-seq genes as disease genes
#23
martinjzhang
opened
2 years ago
0
cope with categorical covariates
#22
KangchengHou
closed
2 years ago
0
Accept categorical covariates
#21
martinjzhang
closed
2 years ago
0
Ordinal covariates
#20
rbutleriii
closed
2 years ago
2
Cleaning/prepping GWAS statistics
#19
rbutleriii
closed
2 years ago
2
Tutorial for preparing files
#18
martinjzhang
closed
2 years ago
0
MC-z and MC-z-based p-value
#17
martinjzhang
closed
2 years ago
2
Correct ctp
#16
martinjzhang
closed
2 years ago
0
Test cli
#15
martinjzhang
closed
2 years ago
2
Continuous weight experiment
#14
KangchengHou
closed
2 years ago
0
Test cli
#13
martinjzhang
closed
2 years ago
0
Change munge-gs; unit tests for munge-gs, load_gs, load_homolog_mapping
#12
martinjzhang
closed
2 years ago
0
Unit test
#11
martinjzhang
closed
2 years ago
0
Unit test
#10
martinjzhang
closed
2 years ago
0
Issue with test run
#9
tkamath1
closed
2 years ago
5
Updated cli
#8
KangchengHou
closed
2 years ago
0
Merge sparse to dense
#7
martinjzhang
closed
2 years ago
0
Gene weights
#6
KangchengHou
closed
2 years ago
0
sparse_mz
#5
martinjzhang
closed
2 years ago
0
Dependency on Background Cells (followup)
#4
NoahMottelson
opened
2 years ago
3
Dependency on background cells
#3
NoahMottelson
closed
2 years ago
3
custom gene set?
#2
pvtodorov
closed
2 years ago
16
Create LICENSE
#1
martinjzhang
closed
2 years ago
0
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