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matchms
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ms2deepscore
Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
Apache License 2.0
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Update MS2DeepScore plus MC version for scoring
#171
florian-huber
closed
5 months ago
2
Remove tensorflow parts from `dev_pytorch` branch.
#170
florian-huber
opened
5 months ago
0
Integrate pytorch training in train ms2deepscore
#169
niekdejonge
closed
5 months ago
0
Dev pytorch
#168
niekdejonge
closed
3 months ago
2
fix_create_plots_for_all_models
#167
niekdejonge
closed
5 months ago
1
Improve plotting
#166
niekdejonge
closed
5 months ago
0
Pytorch version (work in progress)
#165
florian-huber
closed
5 months ago
0
Minor Code Cleaning
#164
florian-huber
closed
7 months ago
0
Move model directory name creation after updating settings
#163
niekdejonge
closed
7 months ago
1
Store settings ms2deepscore
#162
niekdejonge
closed
7 months ago
1
Store settings
#161
niekdejonge
closed
7 months ago
0
Integrate create_plots with training_wrapper_functions.py
#160
niekdejonge
closed
7 months ago
2
Integrate DataGeneratorCherryPicked with DataGeneratorBase
#159
niekdejonge
closed
5 months ago
1
Remove duplicated function in DataGeneratorCherrypicked
#158
niekdejonge
closed
7 months ago
1
Implement GeneratorSettings and implement in rest of code
#157
niekdejonge
closed
7 months ago
1
Fix too little spectra issue
#156
niekdejonge
closed
7 months ago
0
Training crashes, when too little spectra are used.
#155
niekdejonge
opened
7 months ago
7
Complete training pipeline
#154
niekdejonge
closed
7 months ago
0
After downloading the dataset, the code cannot run successfully.
#153
HideAimChinUp
closed
8 months ago
23
Fix visualizations
#152
niekdejonge
closed
7 months ago
0
Add settings ms2 deepscore
#151
niekdejonge
closed
7 months ago
0
Fix visualization
#150
niekdejonge
closed
5 months ago
1
Make a MS2DeepscoreSettings class
#149
niekdejonge
closed
5 months ago
1
Update automatic training pipeline
#148
niekdejonge
closed
7 months ago
1
bit of code cleaning
#147
florian-huber
closed
10 months ago
0
Change cherry picking algorithm
#146
niekdejonge
closed
10 months ago
1
New pair generation
#145
florian-huber
closed
10 months ago
0
Improve spectrum pair selection
#144
florian-huber
closed
10 months ago
1
Add tests for new workflows
#143
florian-huber
opened
11 months ago
0
Add ionization mode generator
#142
niekdejonge
opened
11 months ago
0
Update train_ms2deepscore.py
#141
florian-huber
closed
11 months ago
0
Add load_model function for quick start
#140
florian-huber
opened
1 year ago
2
New library cleaning pipeline
#139
niekdejonge
closed
11 months ago
0
Change design to avoid mistakes in training and saving of models
#138
florian-huber
opened
1 year ago
3
Start switch to pytorch
#137
florian-huber
closed
5 months ago
1
Generator tests
#136
niekdejonge
closed
1 year ago
2
use dummy data for generator tests
#135
florian-huber
closed
1 year ago
2
Clean up data generators
#134
niekdejonge
closed
1 year ago
1
mass shift data augmentation
#133
niekdejonge
closed
1 year ago
6
Split train and run pipeline
#132
niekdejonge
closed
11 months ago
6
Update CI
#131
florian-huber
closed
1 year ago
1
Update CI
#130
florian-huber
closed
1 year ago
1
Tensorflow issue
#129
niekdejonge
closed
1 year ago
2
Spectrum binner to data generator
#128
niekdejonge
closed
1 year ago
1
Calculate tanimoto scores during training
#127
niekdejonge
opened
1 year ago
4
Generic conversion classes
#126
niekdejonge
closed
1 year ago
0
Remove static branches
#125
niekdejonge
closed
1 year ago
0
Train models with Metadata
#124
niekdejonge
closed
11 months ago
8
Saving model non-working
#123
jbcoffin
closed
1 year ago
6
Include additional inputs and scaling into model
#122
florian-huber
closed
1 year ago
4
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