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mcellteam
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mcell
MCell Monte Carlo Simulator of Cellular Microphysiology
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Model Conversion Issue: MDL to Data Model
#44
amgc5
opened
2 years ago
0
Bump urllib3 from 1.22 to 1.26.5 in /docs/pyMCell
#43
dependabot[bot]
opened
3 years ago
3
Bump lxml from 3.7.3 to 4.6.3
#42
dependabot[bot]
closed
3 years ago
1
Bump pygments from 2.2.0 to 2.7.4 in /docs/pyMCell
#41
dependabot[bot]
opened
3 years ago
3
Bump jinja2 from 2.10 to 2.11.3 in /docs/pyMCell
#40
dependabot[bot]
opened
3 years ago
3
Bump lxml from 3.7.3 to 4.6.2
#39
dependabot[bot]
closed
3 years ago
1
Calculation of reaction probabilities
#38
suryaR-15
opened
4 years ago
1
Bump requests from 2.18.4 to 2.20.0 in /docs/pyMCell
#37
dependabot[bot]
closed
3 years ago
1
Bump urllib3 from 1.22 to 1.24.2 in /docs/pyMCell
#36
dependabot[bot]
closed
3 years ago
1
Improve hit counting in pyMCell
#35
adamhusar
opened
4 years ago
0
state of mcell?
#34
dellelce
opened
5 years ago
1
Nfsim dynamic meshes pymcell
#33
andreavs
opened
6 years ago
0
setup.py sdist isn't building nfsim
#32
jczech
opened
6 years ago
0
Add build requirements for OSX to README.
#31
jczech
opened
6 years ago
0
"Molecule release is unable to find surface upon which to place molecule"
#30
Katospiegel
closed
7 years ago
1
Concentration clamp with non-diffusing molecule
#29
jczech
opened
7 years ago
0
Nfsim
#28
jjtapia
closed
8 years ago
0
Surface molecule CROSSINGS and HITS don't work
#27
jczech
opened
8 years ago
1
fixed CMakeLists.txt bug
#26
tgbugs
closed
8 years ago
0
Change DG keyword and default setting
#25
jczech
closed
8 years ago
1
ABSORPTIVE = ALL_MOLECULES
#24
jczech
opened
8 years ago
0
Visualizing molecules for PBCs (non-traditional form)
#23
jczech
closed
8 years ago
1
Surface molecules should obey PBCs
#22
jczech
closed
8 years ago
1
Overlapping/coplanar faces can cause leaks
#21
jczech
closed
8 years ago
9
All geometry files in dynamic geometry file
#20
jczech
closed
8 years ago
1
Intersecting reflective meshes
#19
jczech
opened
8 years ago
1
Add support for INCLUDE_FILE in DG parser
#18
jczech
closed
8 years ago
1
Report File Name and Line Number for all MDL Errors
#17
cnlbob
closed
8 years ago
1
Disallow use of microcopic reversibility with tri-molecular reactions
#16
haskelladdict
closed
9 years ago
1
Instantiating objects with same name
#15
jczech
closed
8 years ago
1
Changing unimolecular rate constant with checkpointing
#14
jczech
closed
8 years ago
1
Deprecate DReAMM related viz commands from QRG
#13
jczech
closed
10 years ago
1
Add CELLBLENDER and ASCII MODE to QRG
#12
jczech
closed
10 years ago
1
NOEXIT option for CHECKPOINT_ITERATIONS
#11
jczech
closed
10 years ago
1
Remove D_ref
#10
jczech
closed
10 years ago
1
Add new checkpointing features to QRG
#9
jczech
closed
9 years ago
1
Parser doesn't check if CHECKPOINT files are set for CHECKPOINT_REALTIME
#8
haskelladdict
closed
10 years ago
0
Changing unimolecular reaction rates through checkpointing
#7
jczech
closed
9 years ago
1
Release site with SHAPE set to uninstantiated box object
#6
jczech
closed
10 years ago
1
Setting C99 flag changes reaction probability reporting on 32-bit builds
#5
jczech
closed
10 years ago
1
Setting RADIAL_DIRECTION or RADIAL_SUBDIVISIONS to zero will give an error
#4
jczech
closed
10 years ago
1
Passing illegal command line arguments can cause a segfault
#3
jczech
closed
10 years ago
2
Changing ITERATION_NUMBERS in viz data can change simulation results
#2
jczech
closed
9 years ago
3
Cannot disable EPS_C warning
#1
jczech
closed
10 years ago
1