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NCI_ChIP-seq
Systematic optimization of parameters for ChIP-Seq peak calling algorithms using simulated short-read sequencing data
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include analysis of effect of parameter choice on peak calling performance
#7
skurscheid
opened
7 years ago
0
adds changes to run on raijin
#6
skurscheid
closed
7 years ago
0
Add building of bowtie2 index from any available FASTA files
#5
skurscheid
closed
7 years ago
1
R package actuar on GDUserv
#4
mevers
closed
7 years ago
2
Paired-end reads
#3
mevers
opened
7 years ago
0
Scale nReads per chromosome depending on total genome size
#2
mevers
opened
7 years ago
0
Simulation of actual Illumina read qualities in ChIPSim
#1
skurscheid
opened
7 years ago
2