issues
search
microbiomedata
/
metaPro
Workflow for meta-proteomics analysis
BSD 2-Clause "Simplified" License
6
stars
3
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
15 metap documentation
#76
picowatt
closed
4 days ago
0
74 update workflow figure
#75
kaijli
closed
4 days ago
0
Update workflow figure
#74
kaijli
closed
4 days ago
0
fix annotation file name
#73
mflynn-lanl
opened
1 month ago
0
docker field is an invalid image name
#72
mflynn-lanl
opened
3 months ago
0
Clean-up inputs
#71
picowatt
opened
3 months ago
0
Add CI/CD for proteomics workflows
#70
aclum
opened
4 months ago
2
68 update readmemd for 20 release
#69
picowatt
closed
6 months ago
0
Update README.md
#68
picowatt
closed
6 months ago
3
Test Kaiko 1.2 with existing WDL
#67
picowatt
closed
7 months ago
1
Feature/1.2.1
#66
picowatt
closed
8 months ago
0
58 metap passing in ids for known files and sourcing those files
#65
picowatt
closed
8 months ago
1
62 kaiko wdl file
#64
picowatt
closed
1 year ago
0
add kaiko shared volume to docker submit for local runs only
#63
picowatt
closed
1 year ago
0
Kaiko WDL file
#62
picowatt
closed
1 year ago
0
Expose Kaikos Static Files to Its Container Via Cromwell Config
#61
picowatt
closed
1 year ago
0
Implement Annotations File Generation
#60
picowatt
opened
1 year ago
1
Investigate GFF or GFF-like file Generation for Kaiko
#59
picowatt
closed
1 year ago
2
metaP passing in IDs for known files and sourcing those files
#58
aclum
closed
8 months ago
3
Automate release packaging using GitHub Actions
#57
picowatt
opened
1 year ago
1
53 make config files inputs
#56
picowatt
closed
1 year ago
0
fix issue with wrong resultant file name being search for
#55
picowatt
closed
1 year ago
0
Incorrect data_object_type for resultant file
#54
picowatt
closed
1 year ago
3
Make config files inputs
#53
picowatt
closed
1 year ago
3
update parent image for postprocessing container
#52
picowatt
closed
1 year ago
0
47 update dockerfile and wdl for metadata generation
#51
picowatt
closed
1 year ago
0
48 stop fdr recalculation if no fasta split occurred
#50
picowatt
closed
1 year ago
0
Report generation Dockerfile using unsupported parent image
#49
picowatt
closed
1 year ago
2
Stop FDR recalculation if no FASTA split occurred
#48
picowatt
closed
1 year ago
0
Update Dockerfile and WDL for metadata generation
#47
picowatt
closed
1 year ago
1
45 generate ids using api
#46
picowatt
closed
1 year ago
0
Generate IDs using API
#45
picowatt
closed
1 year ago
2
MASIC Files not found error during masicresultmerge task
#44
Michal-Babins
opened
1 year ago
0
41 integrate schema pkg into wdl pipeline
#43
picowatt
closed
1 year ago
0
27 qa execution and evaluation
#42
picowatt
closed
1 year ago
0
Integrate schema pkg into WDL pipeline
#41
picowatt
closed
1 year ago
3
33 add fdr calculation to processing
#40
picowatt
closed
1 year ago
0
Integrate Kaiko into WDL pipeline
#39
ssarrafan
opened
1 year ago
5
Unit testing
#38
ssarrafan
closed
1 year ago
3
Add support for filtering taxa
#37
ssarrafan
closed
1 year ago
1
Dockerize Kaiko pipeline
#36
ssarrafan
closed
1 year ago
6
Move Kaiko pipeline to Python 3.9
#35
ssarrafan
closed
1 year ago
6
Combine kaiko-denovo and kaiko-taxonomy
#34
ssarrafan
closed
1 year ago
7
Add FDR calculation to processing
#33
picowatt
closed
1 year ago
1
31 move data defined in env file to wdl inputs and update processing
#32
picowatt
closed
1 year ago
0
Move data defined in .env file to WDL inputs and update processing
#31
picowatt
closed
1 year ago
5
29 adapt ficus analysis script to conform to latest processing
#30
picowatt
closed
2 years ago
0
Adapt ficus analysis script to conform to latest processing
#29
picowatt
closed
2 years ago
1
25 wdl generation make sure it matches the metap pipeline
#28
picowatt
closed
2 years ago
0
QA execution and evaluation
#27
pdpiehowski
closed
1 year ago
13
Next