mitre fusera issues - Githubissues

mitre / fusera

A FUSE interface to the NCBI Sequence Read Archive (SRA)

Apache License 2.0

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issues

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Any way to mount dbGaP folder outside of AWS?

#173 osowiecki opened 1 year ago
0
is ngc file still a valid way to copy over controlled files within aws?

#172 mirahan opened 4 years ago
0
Mounting fastq files when available

#171 AntonS-bio opened 4 years ago
0
Instructions broken on install page

#170 outpaddling opened 4 years ago
0
Access from compute node to the fusera instance mount at master

#169 duanjingqi opened 4 years ago
0
Local and AWS dbGaP key not found using docker image

#168 BrenKenna opened 4 years ago
1
SDL API v2 returned a file without indicating what region it's in

#167 cloudbroken opened 4 years ago
0
Getting 'failed to decode response' error while running sracp

#165 kjamrog opened 5 years ago
1
Transport endpoint is not connected

#164 ericweinberg opened 5 years ago
0
Develop

#163 mattrbianchi closed 5 years ago
0
Remove urfave/cli from listed pkg deps

#162 mattrbianchi closed 5 years ago
0
Update master with version 2 code now that v1 is in a branch

#161 mattrbianchi closed 5 years ago
0
Update for new changes in SDL API. Dubbed version 2

#160 mattrbianchi closed 5 years ago
0
Change requester-pays param to fit SDL API's new accept-charges param

#159 mattrbianchi closed 5 years ago
1
Provide `location-type` parameter to SDL API

#158 mattrbianchi closed 5 years ago
1
Adapt Fusera to the possibility of getting new "redirect" links from API

#157 mattrbianchi closed 5 years ago
1
Add AWS instance token functionality

#156 mattrbianchi closed 5 years ago
1
"fusera mount" will fail if SSH terminal / session is closed ?

#155 fulxie closed 5 years ago
1
Develop

#154 mattrbianchi closed 5 years ago
0
Differentiate between API error and API being down

#153 mattrbianchi opened 5 years ago
0
136/check root

#152 mattrbianchi closed 5 years ago
0
Unable to install on Mac

#151 jcgrenier closed 5 years ago
3
Change User-Agent to binary name and version for sdl req

#150 mattrbianchi closed 5 years ago
0
Corrected passing of platform for sracp

#149 mattrbianchi closed 5 years ago
0
sracp v0.0.17 on an AWS EC2 instance: DEBUG 2019/05/03 20:26:04 root.go:134: location given contained more than one "." which means it cannot be parsed according to expected cloud.region

#148 saulakravitz closed 5 years ago
1
allow_other FUSE option

#147 jonathonl closed 5 years ago
2
Invalid location with sracp V0.0.17 on GCP

#146 jonathonl closed 5 years ago
1
Make fusera and sracp installable through package managers like apt-get.

#145 mattrbianchi opened 5 years ago
0
Fusera and scarp should include binary name and version in http requests to SDL

#144 mattrbianchi closed 5 years ago
0
Add version to help message

#143 mattrbianchi closed 5 years ago
0
Platform now set when using manual location

#142 mattrbianchi closed 5 years ago
0
Issue 135/loc flag seg fault

#141 mattrbianchi closed 5 years ago
0
Amazon Machine Image for fusera?

#140 ramoya closed 5 years ago
1
fusera help should print version number

#139 saulakravitz closed 5 years ago
1
fusera and sracp should have diagnostic mode

#138 saulakravitz opened 5 years ago
1
sracp should check that target location is writeable, and fail with error if not

#137 saulakravitz closed 5 years ago
0
fusera (and sracp?) should issue warning if run as 'root'

#136 saulakravitz closed 5 years ago
0
fusera 0.0.15 Segementation Violation

#135 saulakravitz closed 5 years ago
5
sracp 0.0.15 segmentation violation

#134 saulakravitz closed 5 years ago
1
Add ngc flag back for backwards compatibility

#133 mattrbianchi closed 5 years ago
0
Feature/ngc now token

#132 mattrbianchi closed 5 years ago
0
Add comparison to SRA toolkit to documentation

#131 seandavi opened 6 years ago
3
Add details of what data are available via fusera to documentation?

#130 seandavi closed 5 years ago
1
Change location resolution to read the location from a file on GCP

#129 mattrbianchi closed 5 years ago
1
Rm location

#128 mattrbianchi closed 6 years ago
0
Better user experience with fusera's output

#127 mattrbianchi closed 6 years ago
0
Better sdl printout

#126 mattrbianchi closed 6 years ago
0
Add ability to read requester pays buckets

#125 mattrbianchi closed 6 years ago
0
Add mock sdl api app for testing purposes

#124 mattrbianchi closed 6 years ago
0
Add live error logs for file read errors

#123 mattrbianchi opened 6 years ago
0