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mobie
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spatial-transcriptomics-example-project
An example project for spatial transcriptomics data
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Updates on the spatial transcriptomics project
#29
constantinpape
closed
1 year ago
5
Multi-threading
#28
tischi
opened
1 year ago
1
2D KDTree for data with few z values
#27
tischi
closed
1 year ago
2
Add tables in parquet format
#25
constantinpape
opened
1 year ago
0
Grid view center at origin
#24
tischi
closed
1 year ago
1
Table loading/initialization is slow
#23
constantinpape
closed
1 year ago
21
Selecting spots in image seems to not work if they are transformed...
#22
constantinpape
closed
1 year ago
7
Zoom behaviour is different for first channel vs. other channels
#21
constantinpape
opened
1 year ago
2
superfluous `boundingBoxMax`
#20
tischi
closed
1 year ago
5
boundingBox dimensions order
#19
tischi
closed
1 year ago
1
spotRadius
#18
tischi
opened
1 year ago
2
spotSources in grid views
#17
constantinpape
closed
1 year ago
11
image_and_spots
#16
tischi
closed
1 year ago
1
Names for spot displays are missing
#15
tischi
closed
1 year ago
1
spot tables start with emtpy string column name
#14
tischi
closed
1 year ago
1
additionalTable
#13
tischi
closed
1 year ago
14
Spot distribution along z-axis
#12
tischi
opened
1 year ago
3
View with image and spots
#11
tischi
closed
1 year ago
1
Calibration mismatch
#10
tischi
closed
1 year ago
3
Smaller spots table for testing
#9
tischi
closed
1 year ago
3
Spot coordinates column type
#8
tischi
closed
1 year ago
2
Spots initialisation
#7
tischi
opened
1 year ago
10
Bug in image Pyramid?
#6
tischi
closed
1 year ago
7
spot dimensionality
#5
tischi
opened
1 year ago
3
spot table column names and meaning
#4
tischi
opened
1 year ago
1
Bug in JSON tableData?
#3
tischi
closed
1 year ago
2
SpotDisplay class
#2
tischi
opened
1 year ago
7
Example project for spot sources
#1
constantinpape
opened
2 years ago
0