mojaveazure loomR issues

mojaveazure / loomR

An R-based interface for loom files

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issues

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subsetting loom file

#80 menage95 opened 10 months ago
0
'Error in eval(exprs[i], envir) : object 'confint.default' not found' while trying to install the developmental version 1.0.3.9000

#79 PoGibas closed 1 year ago
1
create() ignores do.transpose=FALSE

#78 smgoggin10 opened 1 year ago
0
Error in private$reset_batch() : attempt to apply non-function

#77 niehu2018 opened 2 years ago
0
get.attribute.df(): unused argument (attribute.names = )

#76 jasminelmah closed 2 years ago
2
Conversion from Seurat to loom

#75 Jeff87075 opened 3 years ago
0
how to merge 6 loom file?

#74 dmsalsgh97 opened 3 years ago
2
Compatibility with R version 4.0.3

#73 nmazare opened 3 years ago
0
Does package support storing info in global attributes?

#72 DanSchnell opened 3 years ago
0
How to save/export loom file

#71 DanSchnell closed 3 years ago
1
LoomR doesn't seem to work

#70 billadelonge opened 3 years ago
3
saving a loomR file

#69 rojinsafavi opened 3 years ago
0
Cannot open loom file

#68 yonatans2 opened 3 years ago
3
get.attribute.df() - how to handle duplicate CellIDs?

#67 reliscu opened 3 years ago
1
Error in (function () : id is invalid

#66 SebRW opened 4 years ago
0
Cannot convert Seurat object to loom

#65 jamiexie opened 4 years ago
2
Package ‘R6’ version 2.4.0 cannot be unloaded:

#64 brianpenghe closed 4 years ago
0
Combine two loom files

#63 MartaBenegas opened 4 years ago
0
Raw Data not Present in Loom File

#62 iSinedeus opened 4 years ago
0
Loom file outdated version for loompy

#61 daccachejoe opened 4 years ago
2
LoomR tutorial doesn't seem to work.

#60 alexandruioanvoda opened 4 years ago
4
LoomR______ Gene Error in attributes[[i]] : subscript out of bounds

#59 JayalalKJ opened 4 years ago
0
Not working with Loompy v3

#58 cbravo93 opened 4 years ago
3
Issues With loomR and Seurat with loom

#57 lololiam opened 4 years ago
1
Error creating loom file from Seurat - Error in attributes[[i]] : subscript out of bounds

#56 swokybio closed 4 years ago
1
There can only be 5 groups in the loom file: ...

#55 tanpuekai opened 4 years ago
5
subset giving HDF5-API Errors

#54 mliiv opened 4 years ago
4
Troubles installing loomR

#53 Olivia117 closed 4 years ago
0
System2 error during installation

#52 GBeattie opened 4 years ago
0
can't install loomR (non-zero exit status or not available for R v3.6.0)

#51 w2niva opened 5 years ago
1
loomR save sparse matrix

#50 ccshao opened 5 years ago
1
Loom file created with subset() not complaint with Loom spec version '2.0.1'

#49 pablo-gar opened 5 years ago
0
Error creating loom file: "all chunk dimensions must be positive"

#48 ShanSabri opened 5 years ago
0
Error in creating loom file

#47 SIGA-HIRI opened 5 years ago
0
Error combining loom outputs from velocyto

#46 davisidarta closed 4 years ago
3
variable length strings in metadata prevent opening loomR output in loompy

#45 ekernf01 opened 5 years ago
1
var genes from Seurat3 object

#44 rmenafra closed 4 years ago
0
DATA NOT CORRELATED WITH CLUSTERS

#43 SaraVilla opened 5 years ago
0
ERROR: lazy loading failed for package 'loomR'

#42 SaraVilla closed 5 years ago
1
HDF5-API Error when attempting to connect to loom file

#41 davisidarta closed 5 years ago
2
Error when adding column attributes with NAs

#40 NathanSkene opened 5 years ago
8
Support for R 3.5+?

#39 zaczap closed 5 years ago
2
row_attrs from create loom vs add.row.attribute

#38 combiz opened 5 years ago
1
Error combining loom files

#37 sarawaise closed 5 years ago
2
Seurat to LoomR: Error in attributes[[i]] : subscript out of bounds

#36 RobertAlpin opened 5 years ago
14
how to convert loom file to seurat object?

#35 Sophia409 closed 5 years ago
4
failed to get metadata from loomR

#34 Sophia409 closed 5 years ago
5
col_attrs question

#33 juliesawitzke opened 5 years ago
1
how to merge loom file with my seurat object?help!!!

#32 Sophia409 closed 5 years ago
0
the warning after connect to the loom file:Moving edge groups to graph groups to conform to loom v2.0.1

#31 Sophia409 closed 5 years ago
1