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molgenis
/
capice
GNU Lesser General Public License v3.0
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Bump scikit-learn from 1.2.1 to 1.5.0
#182
dependabot[bot]
opened
2 months ago
1
Update Requirements section
#181
bartcharbon
closed
5 months ago
1
Request for Testing and Training Datasets for Capice Method
#180
GriffithLin
closed
1 week ago
3
Feat/alpha missense
#179
bartcharbon
closed
5 months ago
1
Fix travis PyPi deploy
#178
bartcharbon
closed
7 months ago
1
Updated VIP VEP command, include GnomadHN
#177
bartcharbon
closed
7 months ago
1
Remove Gnomad_HN and drop GRCh37 from the docs
#176
bartcharbon
closed
7 months ago
1
Inquiry about Features Used in CAPICE with CADD Method
#175
GriffithLin
closed
7 months ago
5
docs: GnomAD patch1 GRCh37 files
#174
SietsmaRJ
closed
7 months ago
2
TypeError: 'type' object is not subscriptable
#173
lqr131115
closed
1 year ago
4
feat: Bind flag pipe through to apptainer
#172
SietsmaRJ
closed
1 year ago
2
version bump
#171
svandenhoek
closed
1 year ago
2
Fix/removed legacy code + general code improvements
#170
svandenhoek
closed
1 year ago
2
id_source output column actually represents symbol source
#169
svandenhoek
opened
1 year ago
0
Fixed a bug that would force the predict output file to always be gzipped (explain)
#168
svandenhoek
closed
1 year ago
2
Fix for multithreading not adhering to set value (also increases train speed).
#167
svandenhoek
closed
1 year ago
1
Setup.py to pyproject.toml
#166
SietsmaRJ
opened
1 year ago
1
fix: Output overwrite without force
#165
SietsmaRJ
closed
1 year ago
1
If output file is created while CAPICE is running, file will be overwritten even without -f
#164
svandenhoek
closed
1 year ago
1
chore: Update and equalize dependencies
#163
SietsmaRJ
closed
1 year ago
1
chore: Re-add gnomAD_HN feature
#162
SietsmaRJ
closed
1 year ago
1
chore: CAPICE 5.1.0 version bump
#161
SietsmaRJ
closed
1 year ago
1
docs: Conversion script pointer
#160
SietsmaRJ
closed
1 year ago
1
fix: Rollback to 4.0.0 output column names
#159
SietsmaRJ
closed
1 year ago
1
Fixed setup.py & README to enforce python3.10 requirement.
#158
svandenhoek
closed
1 year ago
2
Updated xgboost to 1.7.3
#157
svandenhoek
closed
1 year ago
1
Feat/easybuild to apptainer + README/setupy.py adjustments
#156
SietsmaRJ
closed
1 year ago
2
Make features not case sensitive
#155
SietsmaRJ
opened
1 year ago
0
Fixed a bug that would force the predict output file to always be gzipped
#154
svandenhoek
closed
1 year ago
1
Fix/train feature json
#153
SietsmaRJ
closed
1 year ago
1
Decomplexifying CLI
#152
SietsmaRJ
opened
1 year ago
0
Feat/json models
#151
svandenhoek
closed
1 year ago
1
Synonymous input raises unclear error
#150
SietsmaRJ
closed
1 year ago
0
Incorrect model file raises incorrect input error
#149
SietsmaRJ
closed
1 year ago
0
Fix/coverage metrics & building
#148
svandenhoek
closed
1 year ago
2
fix/input digestion (error), minimal required python version & travis
#147
svandenhoek
closed
1 year ago
1
feat: Move balancing script
#146
SietsmaRJ
closed
1 year ago
3
Revert "feat: Improved intron-exon splitting"
#145
svandenhoek
closed
1 year ago
1
Feat/xgboost version bump
#144
svandenhoek
closed
1 year ago
1
feat: Improved intron-exon splitting
#143
SietsmaRJ
closed
1 year ago
1
README updates: Added info about Singularity image and added section with original sources data
#142
svandenhoek
closed
1 year ago
2
feat: 4.0.0 Release
#141
SietsmaRJ
closed
1 year ago
1
chore: Primary branch rename
#140
SietsmaRJ
closed
1 year ago
1
Preprocessor processes irrelevant training features
#139
SietsmaRJ
closed
1 year ago
0
feat: Informative train info log
#138
SietsmaRJ
closed
1 year ago
1
Feat/new features + VEP update
#137
svandenhoek
closed
1 year ago
2
Uniform extra_require naming between repo's.
#136
svandenhoek
closed
1 year ago
1
Feat/simplified bcftools
#135
SietsmaRJ
closed
1 year ago
2
feat: AR Heterozygous gene filtering
#134
SietsmaRJ
closed
1 year ago
2
fix: Allele frequency support
#133
SietsmaRJ
closed
1 year ago
1
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