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mossjacob
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pyslingshot
Python implementation of the Slingshot pseudotime algorithm
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How can we obtain the PseudotimeOrdering similar to those in the R package slingshot using pyslingshot?
#17
Dongjie-orange
opened
1 week ago
0
change color lineages
#16
anke-king
opened
1 month ago
0
TypeError: can only concatenate str (not "int") to str
#15
KeitaSaeki
closed
9 months ago
4
Improve compatibility with AnnData
#14
mossjacob
closed
11 months ago
0
How to use scRNAseq anndata with slingshot python package
#13
ryanhchung
closed
11 months ago
1
easier installation / integration into scverse
#12
esrice
closed
9 months ago
4
Pseudotime
#11
dsm-72
closed
1 year ago
1
ZeroDivisonError
#10
dsm-72
closed
1 year ago
1
Performance and reliability
#9
jeskowagner
opened
2 years ago
1
If clusters are more than 20, the algorithm crashes
#8
YazdanZ
closed
2 years ago
2
rough curves
#7
TiamHeydari
closed
10 months ago
1
ValueError: alpha (nan) is outside 0-1 range
#6
dsm-72
closed
1 year ago
3
how an obtein the pseudotime in a numpy variable
#5
CRISTIANJULIOCESAR
closed
2 years ago
1
Make it available for installation through git
#4
gatocor
closed
2 years ago
0
Fixes clusters bug, adds end nodes support, saving and loading
#3
mossjacob
closed
2 years ago
0
If clusters are more than 10, the algorithm crashes
#2
gatocor
closed
2 years ago
2
Slingshot initial working procedure
#1
mossjacob
closed
3 years ago
0