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mrc-ide
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squire
SEIR transmission model of COVID-19. Documentation at:
https://mrc-ide.github.io/squire/
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Understanding the difference between "infections", "ICase", and "IMild" in format_output
#182
zterner-mitre
opened
5 months ago
1
Can`t install Squire on both R 4.2 and 4.3 on Windows 10
#181
belarus1941
opened
1 year ago
0
Issue Installing
#180
Nimohmwangi
closed
1 year ago
0
Regenerate with newer odin
#179
richfitz
closed
2 years ago
0
regenerate package with odin 1.3.4
#178
slwu89
closed
2 years ago
1
deprecated numerical constants in C code
#177
slwu89
closed
2 years ago
2
drjacby changes in
#176
OJWatson
closed
2 years ago
0
parse_durations fix
#175
OJWatson
closed
2 years ago
0
Fix a few typos in the documentation
#174
pitmonticone
closed
1 year ago
2
error using time varying contact matrices
#173
slwu89
opened
2 years ago
0
Remove check on negative posterior, does not apply posterior is prob density
#172
GBarnsley
closed
2 years ago
1
Sero fitting
#171
OJWatson
closed
2 years ago
0
Added pcr fitting.
#170
RJSheppard
closed
2 years ago
1
sero_df checking and handling correctly
#169
OJWatson
closed
2 years ago
0
0.6.7 sero fitting in
#168
OJWatson
closed
3 years ago
0
Fixed typos in README files
#167
RJSheppard
closed
2 years ago
0
v0.6.6 projections takes nimue
#166
OJWatson
closed
3 years ago
0
0.6.5 further nimue fitting changes
#165
OJWatson
closed
3 years ago
0
Could not install squire: Error message when introducing "devtools::install_github("mrc-ide/squire")"
#164
YKCov19
closed
3 years ago
0
v0.6.4 changes for nimue vaccine fitting
#163
OJWatson
closed
3 years ago
0
Nimue fitting
#162
OJWatson
closed
3 years ago
0
0.6.2 typo in dur_not_get_mv_survive
#161
OJWatson
closed
3 years ago
0
v0.6.1
#160
OJWatson
closed
3 years ago
0
Waning
#159
OJWatson
closed
3 years ago
1
intervention_start_dates_for_odin handle non integer dates
#158
OJWatson
opened
3 years ago
0
Make release on merge
#157
richfitz
closed
3 years ago
0
implementing Gibbs sampling for pmcmc
#156
cwhittaker1000
closed
3 years ago
0
v0.5.5 population$n as integer.
#155
OJWatson
closed
3 years ago
0
Update to use odin 1.1.0
#154
richfitz
closed
3 years ago
0
Port to GHA
#153
richfitz
closed
3 years ago
1
0.5.4
#152
OJWatson
closed
3 years ago
0
beta_est apothecary model compatibility
#151
cwhittaker1000
closed
3 years ago
0
enabling fitting for apothecary
#150
cwhittaker1000
closed
3 years ago
1
Durations together
#149
OJWatson
closed
3 years ago
0
Consolidate all duration parameters in same location
#148
pwinskill
closed
3 years ago
1
0.5.2 parameter documentation update
#147
OJWatson
closed
3 years ago
0
V0.5.1
#146
OJWatson
closed
3 years ago
0
V0.5
#145
OJWatson
closed
3 years ago
0
Update squire parameters
#144
cwhittaker1000
closed
3 years ago
1
If the mod$run is executed again, would it continue from its previous state?
#143
apbarraza
opened
3 years ago
1
Calibrate crashing
#142
flitaiff
opened
3 years ago
0
deaths from treatment tracked
#141
OJWatson
closed
3 years ago
0
0.4.31
#140
OJWatson
closed
3 years ago
0
splines into evaluate_Rt_pmcmc
#139
OJWatson
closed
4 years ago
0
Could not install squire
#138
andrianaimisa
opened
4 years ago
2
Run the model on a City
#137
yijunwang0805
opened
4 years ago
0
0.4.29 incidnece compatibility
#136
OJWatson
closed
4 years ago
0
Output cumulative hospital/ICU incidence
#135
cwhittaker1000
closed
4 years ago
0
5p rt shift
#134
OJWatson
closed
4 years ago
0
6 parameter approach
#133
OJWatson
closed
4 years ago
0
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