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ncbo
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kg-bioportal
BioPortal, as a Knowledge Graph
https://ncbo.github.io/kg-bioportal/
BSD 3-Clause "New" or "Revised" License
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Add combined node and edge counts to dashboard
#100
caufieldjh
closed
1 month ago
0
`ENM` node and edge counts should be counted after merging imports
#99
jmillanacosta
opened
1 month ago
2
Add category-level stats for each ontology
#98
caufieldjh
opened
1 month ago
0
Provide argument to define URL prefix
#97
caufieldjh
opened
1 month ago
0
Include combined node and edge counts on landing page
#96
caufieldjh
closed
1 month ago
0
Functions for merging
#95
caufieldjh
opened
1 month ago
0
Ontology count on dashboard is incorrect
#94
caufieldjh
opened
1 month ago
0
Add decompress function to transformer
#93
caufieldjh
closed
1 month ago
0
Transforms fail when the ontology download is compressed
#92
caufieldjh
closed
1 month ago
0
`MEDDRA` does not transform
#91
caufieldjh
opened
1 month ago
1
Jenkins build failing with `Jenkinsfile not found`
#90
caufieldjh
closed
1 month ago
5
Include most recent submission ID (as of current build) in ontology stats
#89
caufieldjh
opened
1 month ago
0
Compress nodes and edges before upload; remove interstitial files
#88
caufieldjh
closed
1 month ago
0
Rebuild web site
#87
caufieldjh
closed
1 month ago
1
Update README.md
#86
caufieldjh
closed
1 month ago
0
Compress nodes and edges before upload
#85
caufieldjh
closed
1 month ago
0
`GAZ` does not transform
#84
caufieldjh
opened
1 month ago
0
Catch cases of missing latest_submission page
#83
caufieldjh
closed
1 month ago
0
Error from missing `latest_submission` page
#82
caufieldjh
closed
1 month ago
0
Add rate limiting-triggered retry to downloader
#81
caufieldjh
closed
1 month ago
0
Retry when downloads hit a rate limit
#80
caufieldjh
closed
1 month ago
0
Fix #78 and update Jenkins
#79
caufieldjh
closed
1 month ago
0
Jenkins download step fails due to missing `"Content-Disposition"`
#78
caufieldjh
closed
1 month ago
0
More prep and bugfixes for Jenkins build
#77
caufieldjh
closed
1 month ago
0
Get ontology ID only from list file
#76
caufieldjh
closed
1 month ago
0
Skip header in ontology list file
#75
caufieldjh
closed
1 month ago
0
Bugfixes for Jenkins
#74
caufieldjh
closed
1 month ago
2
Align Jenkins with changes to directories
#73
caufieldjh
closed
1 month ago
0
Fix issues with knowledge sources and aggregator
#72
caufieldjh
opened
1 month ago
0
Add edge IDs when they are missing
#71
caufieldjh
opened
1 month ago
0
Get more ontology metadata and pass to the transform step
#70
caufieldjh
closed
1 month ago
0
Rebuild web site
#69
caufieldjh
closed
1 month ago
1
Fix issues with KGX logs
#68
caufieldjh
opened
1 month ago
0
Don't repeat steps if the products already exist
#67
caufieldjh
opened
2 months ago
1
Retrieve ontology version when downloading and pass it to the transformer
#66
caufieldjh
closed
1 month ago
0
Update README.md
#65
caufieldjh
closed
2 months ago
0
Install multi-indexer with pip in Jenkins
#64
caufieldjh
closed
2 months ago
0
Jenkins build publish stage fails due to missing `multi-indexer`
#63
caufieldjh
closed
2 months ago
0
Fixes for the Jenkins build
#62
caufieldjh
closed
2 months ago
2
Fix #60
#61
caufieldjh
closed
2 months ago
0
`kgbioportal get-ontology-list` doesn't work with `api_key` option
#60
caufieldjh
closed
2 months ago
0
Set min python to 3.9; remove Koza
#59
caufieldjh
closed
2 months ago
0
Evaluate whether Python 3.10 is necessary or if 3.9 is enough
#58
caufieldjh
closed
2 months ago
1
Fix #56
#57
caufieldjh
closed
2 months ago
0
Jenkins error: groovy.lang.MissingPropertyException: No such property: MERGEDKGNAME_GENERIC for class: groovy.lang.Binding
#56
caufieldjh
closed
2 months ago
0
Add new Jenkins build process
#55
caufieldjh
closed
2 months ago
0
Abstract ontology retrieval with `ontoportal-client`
#54
caufieldjh
opened
2 months ago
0
Restructuring - transforming to nodes + edges
#53
caufieldjh
closed
2 months ago
1
Restructuring - get all ontologies
#52
caufieldjh
closed
2 months ago
0
Restructuring - Rewrite downloader
#51
caufieldjh
closed
2 months ago
0
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