neurobagel recipes issues

neurobagel / recipes

Configuration files for a Neurobagel deployment.

MIT License

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[REF] Change default profile from `local_node` to `full_stack`

#86 alyssadai closed 1 week ago
1
Change default deployment profile to `full_stack`

#85 alyssadai closed 1 week ago
1
[REF] Create GraphDB password secrets from .txt files instead of env variables

#84 alyssadai closed 1 week ago
2
Rename Docker Compose profiles for `local_node` and `local_federation`

#83 alyssadai opened 1 month ago
0
Rename `NB_API_QUERY_URL` to `NB_API_URL` or similar

#82 alyssadai opened 1 month ago
0
Investigate a debug recipe that extends the production recipe with extra config options

#81 alyssadai opened 1 month ago
0
[REF] Remove container-internal ports and unneeded graph config vars

#80 alyssadai closed 1 month ago
1
[FIX] Revert default image tags to `latest`

#79 alyssadai closed 1 month ago
1
[MNT] Updated `compatibility.yaml` file and e2e tests

#78 rmanaem closed 1 month ago
3
[MNT] Renamed `NB_QUERY_URL_PATH` env var to `NB_QUERY_APP_BASE_PATH`

#77 rmanaem closed 1 month ago
1
[CI] Make first release

#76 alyssadai closed 1 month ago
2
Make first release of recipes

#75 alyssadai closed 1 month ago
1
Rename `NB_QUERY_URL_PATH` env var to `NB_QUERY_APP_BASE_PATH`

#74 rmanaem closed 1 month ago
1
🔄 synced file(s) with neurobagel/workflows

#73 surchs closed 1 month ago
0
[ENH] Removed `local_node_query` profile

#72 rmanaem closed 1 month ago
5
Remove `local_node_query` profile from docker-compose.yml

#70 alyssadai closed 1 month ago
0
[ENH] Added `NB_QUERY_URL_PATH`

#69 rmanaem closed 2 months ago
2
Add `NB_QUERY_URL_PATH` env var

#68 rmanaem closed 2 months ago
1
[ENH] add auth vars to n-API & local query tool and disable by default

#67 alyssadai closed 2 months ago
1
Expose auth variables to n-API

#66 alyssadai closed 2 months ago
1
[ENH] Update environment variables and remove deprecated `version` tag

#65 alyssadai closed 2 months ago
1
Add `NB_FEDERATE_REMOTE_PUBLIC_NODES` to docker-compose.yml

#64 alyssadai closed 2 months ago
1
Add authentication-related environment variables

#63 alyssadai closed 2 months ago
1
Remove configurable `NB_GRAPH_ROOT_HOME` from template.env

#62 alyssadai closed 2 months ago
1
[ENH] Added `NB_FEDERATE_REMOTE_PUBLIC_NODES` env var

#61 rmanaem closed 4 months ago
1
Add `NB_FEDERATE_REMOTE_PUBLIC_NODES` env var

#60 rmanaem closed 4 months ago
1
[TBD] Passwords with `$` in them break setup

#59 surchs closed 1 week ago
6
🔄 synced file(s) with neurobagel/workflows

#58 surchs closed 4 months ago
0
[FIX] Enable graph setup to run on stack restart

#57 surchs closed 4 months ago
1
remove `version` tag in docker-compose.yml

#56 surchs closed 2 months ago
1
[ENH] replace bind-mount for graphDB home with docker volume

#55 surchs closed 4 months ago
1
[BUG] adding new data `LOCAL_GRAPH_DATA` does not get uploaded to graph on stack restart

#54 surchs closed 4 months ago
2
switching default in template.env back to localhost:8080

#53 surchs opened 5 months ago
1
Ensure graph can do clean restart after data model change

#52 surchs closed 4 months ago
1
[FIX] Fix the compatibility workflows

#51 surchs closed 4 months ago
1
[MNT] Use docker compose secrets for sensitive credentials

#50 alyssadai closed 5 months ago
1
Make all scripts exit on error

#49 alyssadai opened 5 months ago
1
[ENH] Add `COMPOSE_PROJECT_NAME` to template.env

#48 alyssadai closed 5 months ago
1
Give `compatibility-test copy.yaml` a more informative name

#47 alyssadai closed 1 month ago
2
[REF] Consolidate deployment recipes and refactor template.env

#46 alyssadai closed 5 months ago
1
Remove deployment-specific Compose files and consolidate repo

#45 alyssadai closed 5 months ago
1
[ENH] Separate /data mount points, separate query tool profiles

#44 alyssadai closed 5 months ago
1
[FIX] Use `NB_GRAPH_ROOT_CONT` in `setup.sh`

#43 surchs closed 5 months ago
3
[FIX] Remove default `NB_API_QUERY_URL` value and fix ports used by full-stack setup script

#42 alyssadai closed 5 months ago
1
Make mountpoints in `dev` recipe non-overlapping

#40 surchs closed 5 months ago
1
`setup.sh` steps use host port for GraphDB home when called inside container

#39 alyssadai closed 5 months ago
1
Environment variable for mounted GraphDB home directory not used

#38 alyssadai closed 5 months ago
3
[ENH] Add version compatibility check for all latest builds

#37 surchs closed 5 months ago
1
[CI] Set up `compatibility test` workflow

#35 rmanaem closed 5 months ago
1
Document how to write files to host as non-root

#34 alyssadai opened 5 months ago
1