neurorestore Libra issues

neurorestore / Libra

MIT License

153 stars 25 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Application of Libra to my dataset

#19 RobertWhitener opened 2 years ago
2
I change the param in edgeR-LRT, and get a better result.

#18 huanananan opened 2 years ago
1
limma not working correctly

#17 chengmingbo opened 2 years ago
2
Differential expression on genes detected in min number of cells

#16 sshakil12 opened 2 years ago
1
cell_type not found when subsetting object

#15 MjelleLab opened 2 years ago
3
Error in `group_by()`: Column `cell_type` is not found.

#14 sshakil12 closed 2 years ago
10
Can Libra be used in other setting?

#13 favilaco opened 2 years ago
4
Error in extract(., , meta0$cell_barcode)

#12 sshakil12 closed 2 years ago
2
limma trend and voom

#11 alikhuseynov closed 2 years ago
2
Genes with same adj p-val, p-val and log FC?

#10 anjkris opened 2 years ago
1
Column `cell_type` is not found.

#9 fredust closed 2 years ago
16
cell_type not found for example dataset from Zenodo

#8 stanleyjs opened 2 years ago
1
cell_type not found

#7 Jeron1996 closed 2 years ago
6
DEseq2 cell_type not found

#6 nihalasalem opened 3 years ago
11
Expression matrix has at least one dimension of size zero

#5 jenellewallace opened 3 years ago
3
Save normalized counts from pseudobulk method(s)

#4 lianov opened 3 years ago
2
How take into account for batch effect ?

#3 lmassenet-regad opened 3 years ago
5
Clarification on the use of delta variance

#2 juliaszusz opened 3 years ago
3
issue with n_threads, signs of logFC and type of log

#1 mihem closed 3 years ago
3