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nf-core
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hic
Analysis of Chromosome Conformation Capture data (Hi-C)
https://nf-co.re/hic
MIT License
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Process `NFCORE_HIC:HIC:COOLER:COOLER_MAKEBINS (null})` terminated with an error exit status (127)
#203
panpap25
opened
1 month ago
1
Fatal error related to the format of the input files
#202
panapapa14
closed
1 month ago
0
What are the restriction enzymes name used by Arima?
#201
RezwanCAAS
opened
1 month ago
0
Important! Template update for nf-core/tools v2.14.1
#200
nf-core-bot
opened
1 month ago
0
Important! Template update for nf-core/tools v2.14.0
#199
nf-core-bot
closed
1 month ago
1
Reopening the split-fastq error
#198
Krithika-Bhuvan
opened
2 months ago
0
Add nf-validation
#197
edmundmiller
closed
2 months ago
1
Add nf-test
#196
edmundmiller
closed
3 months ago
2
style: Fix editorconfig errors
#195
edmundmiller
closed
3 months ago
5
Important! Template update for nf-core/tools v2.13.1
#194
nf-core-bot
closed
3 months ago
4
[Question] Mad-max filter
#193
jeff-godwin
opened
4 months ago
0
Important! Template update for nf-core/tools v2.13
#192
nf-core-bot
closed
4 months ago
0
Important! Template update for nf-core/tools v2.12
#191
nf-core-bot
closed
4 months ago
1
Improve multiQC report
#190
nservant
opened
5 months ago
0
Add loop calling tools
#189
nservant
opened
5 months ago
1
add calder2 module
#188
nservant
opened
5 months ago
0
add parameter to tune balancing
#187
nservant
closed
5 months ago
1
Important! Template update for nf-core/tools v2.11
#186
nf-core-bot
closed
5 months ago
1
NFCORE_HIC:HIC:FASTQC error: fastqc tmp dir on HPC
#185
PaolaD
closed
5 months ago
0
Filter out interchromosomal interactions
#184
yulong-su
closed
7 months ago
1
Param validation
#183
Mia0509
opened
8 months ago
2
NFCORE_HIC:HIC:CUSTOM_DUMPSOFTWAREVERSIONS (1) terminated with an error exit status (1)
#182
aghr
opened
8 months ago
4
Update eigscis.nf
#181
ChristopherBarrington
closed
5 months ago
1
java error
#180
AlcaArctica
opened
8 months ago
1
samplesheet error
#179
AlcaArctica
closed
5 months ago
3
Difference in the detection of validpair interactions between various version of hic
#178
koushik20
closed
5 months ago
2
Important! Template update for nf-core/tools v2.10
#177
nf-core-bot
closed
6 months ago
1
sort extreme large pairs files
#176
andyyhchen
opened
11 months ago
0
Important! Template update for nf-core/tools v2.9
#175
nf-core-bot
closed
9 months ago
1
bwa-mem / pairtools
#174
nservant
closed
4 months ago
5
Fix: COOLTOOLS insulation not parsed correctly
#173
adamrtalbot
closed
1 year ago
1
COOLTOOLS_INSULATION creates invalid software version on Azure Batch
#172
adamrtalbot
closed
1 year ago
0
Remove public_aws_ecr profile
#171
adamrtalbot
closed
1 year ago
3
Update public_aws_ecr.config
#170
maxulysse
closed
1 year ago
1
Release candidate 2.1.0
#169
maxulysse
closed
1 year ago
1
CHORES: Prepare release
#168
maxulysse
closed
1 year ago
2
Exit error 140
#167
ninashenker
closed
5 months ago
2
Add public_aws_ecr profile for using public ECR images
#166
adamrtalbot
closed
1 year ago
1
Update modules
#165
adamrtalbot
closed
1 year ago
2
Put FastQ File Splitting in a Dedicated Process
#164
ieres-amgen
opened
1 year ago
8
Certain sample names produce a missing header error on INPUT_CHECK:SAMPLESHEET_CHECK step
#163
cnluzon
closed
1 year ago
2
Include pairtools protocol
#162
nservant
opened
1 year ago
3
Default insulation methods
#161
nservant
closed
1 year ago
1
Fastqc in MultiQC report
#160
nservant
closed
5 months ago
2
Important! Template update for nf-core/tools v2.8
#159
nf-core-bot
closed
1 year ago
1
Bowtie2 Mapping Alignment exceeded running time limit error
#158
koushik20
closed
1 year ago
3
Change bwt2_index input to take input tar/tar.gz file rather than path + base name
#157
IttaiEres
opened
1 year ago
0
Error executing process > 'combine_mates'
#156
tim4berg
closed
5 months ago
2
Fixed some spelling mistakes in the Output documentation
#155
jzohren
closed
1 year ago
1
how to set the number of cpu for hic mapping
#154
zhoudreames
closed
1 year ago
0
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