nf-core kmermaid issues

nf-core / kmermaid

k-mer similarity analysis pipeline

https://nf-co.re/kmermaid

MIT License

19 stars 12 forks source link

issues

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(We are so) back to dev

#159 itrujnara closed 2 days ago
1
Manual template update to 3.0.2

#158 itrujnara closed 4 days ago
1
Important! Template update for nf-core/tools v2.7.2

#157 nf-core-bot closed 2 days ago
0
Important! Template update for nf-core/tools v2.7.1

#156 nf-core-bot closed 1 year ago
1
Important! Template update for nf-core/tools v2.6

#155 nf-core-bot closed 1 year ago
1
Important! Template update for nf-core/tools v2.5.1

#154 nf-core-bot closed 2 years ago
1
Important! Template update for nf-core/tools v2.5

#153 nf-core-bot closed 2 years ago
1
Fixes to run in July 2022

#152 olgabot opened 2 years ago
0
Important! Template update for nf-core/tools v2.4

#151 nf-core-bot closed 2 years ago
1
Important! Template update for nf-core/tools v2.3.2

#150 nf-core-bot closed 2 years ago
1
Important! Template update for nf-core/tools v2.3.1

#149 nf-core-bot closed 2 years ago
1
Update schema and change default `String` values to `null` instead of `false`

#148 maxibor opened 2 years ago
0
Important! Template update for nf-core/tools v2.3

#147 nf-core-bot closed 2 years ago
2
Important! Template update for nf-core/tools v2.2

#146 nf-core-bot closed 2 years ago
1
Important! Template update for nf-core/tools v2.1

#145 nf-core-bot closed 2 years ago
1
Important! Template update for nf-core/tools v2.0.1

#144 nf-core-bot closed 3 years ago
1
Important! Template update for nf-core/tools v2.0

#143 KevinMenden closed 3 years ago
1
Important! Template update for nf-core/tools v1.14

#142 nf-core-bot closed 3 years ago
1
Pipeline has 2 releases, but default branch is dev

#141 maxulysse opened 3 years ago
0
Add --singleton option for sourmash

#140 olgabot opened 3 years ago
0
TEMPLATE needs cleaning

#139 ewels opened 3 years ago
0
Important! Template update for nf-core/tools v1.13.2

#138 nf-core-bot closed 3 years ago
2
Important! Template update for nf-core/tools v1.13.1

#137 KevinMenden closed 3 years ago
1
Important! Template update for nf-core/tools v1.13

#136 nf-core-bot closed 3 years ago
0
Add sourmash search

#135 olgabot opened 3 years ago
0
Add hash2kmer.py code to get potential genes and sequences for each k-mer hash

#134 olgabot opened 3 years ago
0
KMERMAID: Convert all parameter docs to JSON schema

#133 apeltzer opened 3 years ago
1
olgabot/sourmash sig merge v2

#132 olgabot closed 3 years ago
1
Remove constitutive k-mers

#131 olgabot opened 3 years ago
0
Update to sourmash 4.0

#130 olgabot opened 3 years ago
0
Output fastas for translate

#129 olgabot closed 3 years ago
1
sencha to orpheum

#128 pranathivemuri closed 3 years ago
2
Add option to remove hashes, e.g. ribosomal seqs

#127 olgabot opened 3 years ago
2
Separate cell barcode counting and filtering

#126 olgabot opened 3 years ago
0
Don't save translate CSV or JSON

#125 olgabot closed 3 years ago
1
Update default translate parameters

#124 olgabot closed 3 years ago
1
Important! Template update for nf-core/tools v1.12.1

#123 nf-core-bot closed 3 years ago
1
Output all informational BAM tags to fastq

#122 olgabot closed 3 years ago
1
template merge

#121 pranathivemuri closed 3 years ago
0
Important! Template update for nf-core/tools v1.12

#120 nf-core-bot closed 4 years ago
1
Merging template updates

#119 pranathivemuri closed 4 years ago
4
Add option to query newly created signatures with "sourmash search"

#118 olgabot opened 4 years ago
0
olgabot/sourmash sig merge

#117 olgabot closed 3 years ago
5
olgabot/do all ksizes at once

#116 olgabot closed 4 years ago
2
olgabot/sourmash index

#115 olgabot closed 3 years ago
3
Important! Template update for nf-core/tools v1.11

#114 nf-core-bot closed 4 years ago
2
address changes in review PR

#113 pranathivemuri closed 4 years ago
2
Pseudo PR - community review for initial release

#112 ewels closed 3 years ago
5
per cell bams

#111 lekhakaranam closed 3 years ago
2
Template merge

#110 pranathivemuri closed 4 years ago
1