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nf-core
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rnafusion
RNA-seq analysis pipeline for detection of gene-fusions
https://nf-co.re/rnafusion
MIT License
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Pipeline gets stuck during reference building
#499
frenkiboy
closed
1 week ago
1
A question about strandedness
#498
ValentineObrezanenko
opened
1 week ago
0
Use quay.io as registry for all containers
#497
maxulysse
opened
2 weeks ago
1
Add option to wget to ignore proxy certificates
#496
apeltzer
closed
4 weeks ago
1
Arriba download -- proxy issues
#495
apeltzer
opened
4 weeks ago
2
Error executing process
#494
zalsafwani
closed
3 weeks ago
0
ARRIBA_VISUALISATION depends on STAR-FUSIOn rather than ARRIBA ?
#493
HCLbioinfo
opened
1 month ago
0
Remove fusiongdb references in documentation
#492
rannick
opened
2 months ago
0
update docs
#491
asp8200
closed
2 months ago
1
Tiny update of docs
#490
asp8200
closed
2 months ago
2
Error, no fusion contigs written at /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_pair_to_mini_genome_join.pl
#489
HCLbioinfo
opened
3 months ago
0
Add normalized gene expression
#488
rannick
closed
3 months ago
1
Fusioninspector issue - strand GstrandBit problem
#487
APL-MolecularPathology
opened
3 months ago
0
Important! Template update for nf-core/tools v2.14.1
#486
nf-core-bot
closed
3 months ago
1
Important! Template update for nf-core/tools v2.14.0
#485
nf-core-bot
closed
3 months ago
1
Update modules and use nf-core modules
#484
rannick
opened
4 months ago
1
Release 3.0.2
#483
rannick
closed
4 months ago
1
fix logical gate: when stringtie and not starfusion, only alignment i…
#482
rannick
closed
5 months ago
1
Vcf fix2
#481
rannick
closed
5 months ago
2
Merging 2.13.1
#480
rannick
closed
5 months ago
1
Upgrade to nf-validation 2.0
#479
rannick
opened
5 months ago
0
Fusioncatcher build fails
#478
apeltzer
opened
5 months ago
6
Please pin the version of the `nf-validation` plugin!
#477
mirpedrol
closed
5 months ago
1
Move previous tests for inputs into the format of template 2.13.1
#476
rannick
opened
6 months ago
0
Pre-merging 2.13.1
#475
rannick
closed
6 months ago
0
update collectrnaseqmetrics memory requirement
#474
rannick
closed
5 months ago
3
Important! Template update for nf-core/tools v2.13.1
#473
nf-core-bot
closed
5 months ago
1
Update local CollectRNASeqMetrics module -Xmx mem
#472
rndw
closed
6 months ago
1
URGENT: pin nf-validation version
#471
nvnieuwk
closed
6 months ago
4
Important! Template update for nf-core/tools v2.13
#470
nf-core-bot
closed
6 months ago
0
Update STAR-Fusion
#469
rannick
opened
6 months ago
0
vcf_collect fusion split error
#468
berguner
closed
5 months ago
3
Fix vcf
#467
rannick
closed
7 months ago
1
Fix bug using whitelist parameter
#466
rannick
closed
7 months ago
2
Fix vcf
#465
rannick
closed
7 months ago
3
Important! Template update for nf-core/tools v2.12
#464
nf-core-bot
closed
7 months ago
1
fix starfusion download output for gtf to refflat
#463
dodslaser
opened
7 months ago
1
error when using whitelist parameter
#462
ahwanpandey
closed
5 months ago
0
Segmentation fault (core dumped) for fusion_catcher
#461
ZheFrench
closed
5 months ago
1
Error in NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT
#460
vwucher
closed
5 months ago
3
Update module config
#459
fevac
closed
6 months ago
2
fix vcf_collect when a tool is absent
#458
rannick
closed
7 months ago
3
Important! Template update for nf-core/tools v2.11.1
#457
nf-core-bot
closed
7 months ago
1
Important! Template update for nf-core/tools v2.11
#456
nf-core-bot
closed
8 months ago
1
building reference with singularity profile
#455
nservant
closed
5 months ago
8
Reason for removing SQUID and Pizzly in recent release.
#454
Joshuasync
closed
8 months ago
1
Release 3.0.1
#453
rannick
closed
9 months ago
1
Python3 tag is mandatory on some large scale cluster: local changes
#452
rannick
closed
9 months ago
1
fix versions
#451
rannick
closed
9 months ago
1
Python3 tag is mandatory on some large scale cluster
#450
aghozlane
closed
9 months ago
2
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