nf-core vipr issues - Githubissues

nf-core / vipr

Assembly and intrahost / low-frequency variant calling for viral samples

https://nf-co.re/vipr

MIT License

14 stars 12 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Missing TEMPLATE branch

#36 maxulysse opened 4 years ago
0
Add social preview image

#35 maxulysse opened 4 years ago
0
Error executing process > gap_fill_assembly

#34 ahmedmoustafa opened 5 years ago
0
Pipeline development

#33 kokyriakidis opened 5 years ago
1
Prepare for nf-core sync

#32 sven1103 opened 5 years ago
0
Dev > Master

#31 ewels closed 5 years ago
0
Updated base code to pass nf-core lint tests

#30 ewels closed 5 years ago
2
params.tracedir in nextflow.config

#29 Ritzttk closed 5 years ago
4
Error when run pipeline with docker file

#28 Ritzttk opened 5 years ago
4
Remove unrequired AWSBatch check already present l55+

#27 apeltzer closed 5 years ago
0
Error on VIPR4

#26 Ritzttk closed 5 years ago
9
Add your name to copyright in licence.md

#25 apeltzer opened 6 years ago
0
Speed up consensus iteration

#24 andreas-wilm opened 6 years ago
1
Naming conventions

#23 apeltzer opened 6 years ago
0
Add CHANGELOG

#22 maxulysse closed 6 years ago
3
Add profiles to fix #5

#21 apeltzer closed 6 years ago
0
Fixes for #2 and README

#20 apeltzer closed 6 years ago
0
Add a DOI on first release

#19 apeltzer opened 6 years ago
0
According to @ewels, this default behaviour should be removed.

#18 alneberg closed 6 years ago
0
new Singularity image close #16

#17 maxulysse closed 6 years ago
0
add Singularity file

#16 maxulysse closed 6 years ago
0
add CHANGELOG

#15 maxulysse closed 6 years ago
0
Fix font logo problem

#14 maxulysse closed 6 years ago
0
Remove groovy meta-declaration

#13 pditommaso closed 6 years ago
1
Get rid of Groovy flag in GitHub

#12 apeltzer closed 6 years ago
1
Fix logo font

#11 andreas-wilm closed 6 years ago
4
Run nf-core lint

#10 andreas-wilm opened 6 years ago
2
Fix file permissions for published {sample}_polished_assembly.fa

#9 andreas-wilm opened 6 years ago
0
create BWA index for contamination reference if missing

#8 andreas-wilm opened 6 years ago
1
Add support for single-end read data

#7 andreas-wilm opened 6 years ago
1
Allow other means of read input besides params.yaml

#6 andreas-wilm opened 6 years ago
1
Add aws, docker and singularity profiles

#5 andreas-wilm closed 6 years ago
0
Add docs/configuration

#4 andreas-wilm opened 6 years ago
0
Add a report (MultiQC) summarizing analysis

#3 andreas-wilm opened 6 years ago
1
Push containers to nf-core

#2 andreas-wilm closed 6 years ago
1
CI tests missing

#1 andreas-wilm opened 6 years ago
1