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nipy
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heudiconv
Flexible DICOM conversion into structured directory layouts
https://heudiconv.readthedocs.io
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Check if acq_time has ms and add .0 if not
#680
crcox
closed
1 year ago
5
`heudiconv/tests/test_main.py::test_prepare_for_datalad - AssertionError` on both
#679
TheChymera
opened
1 year ago
3
Heudiconv for multiple sessions
#678
dhivyasrin
opened
1 year ago
1
[gh-actions](deps): Bump codespell-project/actions-codespell from 1 to 2
#677
dependabot[bot]
closed
1 year ago
2
no matches found for directory when I try to use heudiconv to convert data
#676
PHAEDONY
opened
1 year ago
0
Make .subsecond optional in BIDS/DICOM datetime entries
#675
yarikoptic
closed
1 year ago
2
Heudiconv not detecting some dicom files
#674
diramigo
opened
1 year ago
0
Make an `embed_dicom_and_nifti_metadata()` annotation work on Python 3.7
#673
jwodder
closed
1 year ago
4
typing related error in metadata embedding.
#672
bpinsard
closed
1 year ago
4
Declare `custom_grouping` return type instead of casting
#671
jwodder
closed
1 year ago
4
`numpy.AxisError: axis 1 is out of bounds for array of dimension 1`
#670
andrew-yian-sun
closed
6 months ago
27
ENH: set and expose global dicom compresslevel var
#669
octomike
closed
1 year ago
2
Use `pydicom.dcmread()` instead of `pydicom.read_file()`
#668
jwodder
closed
1 year ago
3
pydicom warnings encountered during `test_b0dwi_for_fmap`
#667
jwodder
opened
1 year ago
3
Make `test_private_csa_header` test write to temp dir
#666
jwodder
closed
1 year ago
2
Tests should not write to `heudiconv/tests/data/` folder
#665
jwodder
opened
1 year ago
0
Write command arguments as lists of strings instead of splitting strings on whitespace
#664
jwodder
closed
1 year ago
3
Add `sample_nifti.json` to `.gitignore`
#663
jwodder
closed
1 year ago
4
Remove kludgy support for older versions of pydicom and dcmstack
#662
jwodder
closed
1 year ago
3
Replace third-party `mock` library with stdlib's `unittest.mock`
#661
jwodder
closed
1 year ago
3
Fix some strings with \ (make them raw or double-\), improve pytest config: move to tox.ini, make unknown warnings into errors
#660
jwodder
closed
1 year ago
2
Don't call `logging.basicConfig()` in `__init__.py`
#659
jwodder
closed
1 year ago
3
Add & apply pre-commit and lint job
#658
jwodder
closed
1 year ago
6
heudiconv failure with false report of successful conversion
#657
andycon
closed
1 year ago
3
Add type annotations
#656
jwodder
closed
1 year ago
21
Remove use of `six`
#655
jwodder
closed
1 year ago
2
Replace py.path with pathlib
#654
jwodder
closed
1 year ago
2
initiate typing checks
#653
yarikoptic
closed
1 year ago
1
[DATALAD RUNCMD] produce updated dockerfile
#652
yarikoptic
closed
1 year ago
1
Re-add explicit instructions to install dcm2niix "manually" and remove it from install_requires
#651
yarikoptic
closed
1 year ago
3
Mention `codespell` in CONTRIBUTING.rst ?
#650
psadil
opened
1 year ago
0
IntendedFor population crashing heudiconv with Siemens XA dicoms
#649
jmatthews-rotman
closed
1 year ago
1
Installation of dcm2niix from PyPi does not support use in container with arbitrary UID
#648
jennydaman
closed
1 year ago
4
strip non-alphanumeric from session ids too
#647
yarikoptic
closed
1 year ago
2
Some sample source of DICOMs to add to docmentation
#646
yarikoptic
opened
1 year ago
0
Clarify the infotodict function
#645
yarikoptic
closed
1 year ago
2
Reword and correct punctuation on usage.rst
#644
candleindark
closed
1 year ago
2
Reword and correct punctuation on installation.rst
#643
candleindark
closed
1 year ago
2
Docker images: tag also as "unstable", strip "v" prefix, and avoid building in non-release workflow for releases.
#642
yarikoptic
closed
1 year ago
2
Contributing guide.
#641
TheChymera
closed
1 year ago
4
add install link to README
#640
asmacdo
closed
1 year ago
2
Reword number of intended ideas in README.rst
#639
candleindark
closed
1 year ago
2
Skip tests with optional dependencies
#638
asmacdo
opened
1 year ago
0
add custom_info to group_dicoms_into_seqinfos call in parser
#637
bpinsard
closed
1 year ago
5
provide CONTRIBUTING.md (or .rst)
#636
yarikoptic
closed
1 year ago
1
Add 3.11 to be tested etc
#635
yarikoptic
closed
1 year ago
4
Also tolerate IndexError while trying to delete a field in mw
#634
yarikoptic
opened
1 year ago
4
heudiconv crashes when converting a derived ADC map from Siemens scanner
#633
neurorepro
opened
1 year ago
5
Added distribution badges
#632
TheChymera
closed
1 year ago
5
Setting git author and email in test environment
#631
TheChymera
closed
1 year ago
5
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