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nipy
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heudiconv
Flexible DICOM conversion into structured directory layouts
https://heudiconv.readthedocs.io
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Add documentation building instructions
#730
asmacdo
closed
7 months ago
4
rst paths must be relative to the docs/ dir
#729
asmacdo
closed
7 months ago
1
properly remove GE multiecho bvals/bvecs
#728
bpinsard
closed
6 months ago
2
Add/Extend dataset_description.json:GeneratedBy with information about heudiconv/heuristic (if possible)/dcm2niix
#727
yarikoptic
opened
7 months ago
0
No need to specify user for podman run as non-root
#726
asmacdo
closed
7 months ago
1
Can't rebuild joss paper
#725
TheChymera
closed
7 months ago
7
Make README more concrete
#724
asmacdo
closed
8 months ago
2
[gh-actions](deps): Bump actions/setup-python from 4 to 5
#723
dependabot[bot]
closed
6 months ago
2
Drop Python 3.7 support
#722
yarikoptic
closed
8 months ago
6
Ran pre-commit on everything, black decided to adjust some formatting
#721
yarikoptic
closed
8 months ago
3
Failure due to binary incompatibility in Singularity image for Heudiconv 1.0.0
#720
pcamach2
closed
9 months ago
4
INFO: Need to process 0 study sessions
#719
zinnc
opened
9 months ago
0
ReproIn: give an informative assertion message when multiple values are found
#718
yarikoptic
closed
9 months ago
2
[JOSS]: walk through documentation to catch deficiencies
#717
yarikoptic
closed
6 months ago
2
[JOSS]: Add a figure outlining typical heudiconv "workflow"
#716
yarikoptic
closed
7 months ago
0
[JOSS]: Add more on state of the field
#715
yarikoptic
closed
6 months ago
1
[JOSS]: Figure 2 - update with fresh data and clarify how data could be refreshed
#714
yarikoptic
closed
6 months ago
1
added asl-support content in utils.py and dicoms.py files
#713
pbbaba
closed
7 months ago
3
Issues while building the dockerfile
#712
pbbaba
closed
10 months ago
2
ASL Support
#711
pbbaba
opened
10 months ago
1
added elements required for asl
#710
pbbaba
closed
10 months ago
0
Convert assertion into a warning that we would not use dicom dir tempate option
#709
yarikoptic
closed
11 months ago
2
Do not demand --files for all commands, even those which do not care about it (like populate-intended-for)
#708
yarikoptic
closed
11 months ago
2
Commandline --command option usage
#707
pbbaba
closed
11 months ago
14
Add codespell to lint tox env
#706
yarikoptic
closed
11 months ago
1
Conda installation problem
#705
papaya454
closed
11 months ago
2
Reading Phase Encoding from JSON into {dir}
#704
amirhusseinab
opened
11 months ago
1
[gh-actions](deps): Bump actions/checkout from 3 to 4
#703
dependabot[bot]
closed
11 months ago
2
Various tiny enhancements flake etc demanded
#702
yarikoptic
closed
11 months ago
3
Implement run+? which would make increment within that sequence
#701
yarikoptic
opened
12 months ago
2
dicominfo not reporting all information
#700
araikes
opened
12 months ago
1
Boost claimed BIDS version to 1.8.0 from 1.4.1
#699
yarikoptic
closed
11 months ago
2
BIDSVersion in data_description.json file
#698
pbbaba
closed
11 months ago
11
support dcm2niix "Bidsguess"
#697
yarikoptic
opened
1 year ago
0
[DOC] Lacking information about heudiconv commands populate-templates etc
#696
askieslinger
opened
1 year ago
1
ENH: raise exception if dcm2niix returns with non-0 code
#695
yarikoptic
opened
1 year ago
1
heudiconv produces strange filenames with _heudiconv740_Eq_1 at the end
#694
askieslinger
closed
1 year ago
1
Add handling of renaming files after dcm2niix conversion
#693
yarikoptic
opened
1 year ago
1
idea: heuristic call back after converting a subject/session or dcm2niix conversion
#692
yarikoptic
opened
1 year ago
0
idea: Produce a result record from the run
#691
yarikoptic
opened
1 year ago
0
Fix metadata
#690
xuanxu
closed
1 year ago
1
Issue a warning if there fieldmaps but they were not applied to any sequence
#689
yarikoptic
opened
1 year ago
1
Option(s) or heuristic component to augment metadata in sidecars
#688
yarikoptic
opened
1 year ago
0
assert HEUDICONV_VERSION_JSON_KEY not in json_ AssertionError. XA30 subjects failing conversion.
#687
Noah-Baden
opened
1 year ago
7
Logger debug level could be better inherited by reproin.py
#686
QihangYao
opened
1 year ago
0
test-compare-two-versions.sh: also ignore differences in HeudiconvVersion field in jsons since we have it there now
#685
yarikoptic
closed
1 year ago
2
Seriesgrouping
#684
neurorepro
opened
1 year ago
10
Inconsistent behavior when there shouldn't be several study UIDs
#683
neurorepro
opened
1 year ago
0
Fix inconsistent behavior of existing session when using -d compared to --files option: raise an AssertionError instead of just a warning
#682
neurorepro
closed
1 year ago
3
Add description of placeholders which could be used in the produced templates
#681
yarikoptic
closed
1 year ago
3
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