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ohsu-comp-bio
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cwl-tes
cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
Apache License 2.0
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Feedback for CWL v1.2.1 requested
#63
acoleman2000
opened
1 year ago
0
V0.4.0 remove outdir
#62
sofiakarb
closed
1 year ago
0
Added basic auth credentials for Funnel
#61
zagganas
closed
1 year ago
1
[WIP] Updating links to newer cwl-tool and cwl1.2
#60
kellrott
opened
2 years ago
0
V0.4.0 [WIP]
#59
kellrott
opened
2 years ago
0
Upgraded version of cwltool to 3
#58
zagganas
opened
2 years ago
3
S3 support ported from PR#38
#57
aniewielska
closed
2 years ago
0
Merging update branches
#56
kellrott
closed
2 years ago
0
Starting to convert Travis-CI operations to Github actions
#55
kellrott
closed
2 years ago
0
Disabling JWT audience validation
#54
uniqueg
closed
2 years ago
1
Output directories downloaded as text files
#53
uniqueg
opened
2 years ago
0
Only download required input files
#52
uniqueg
opened
2 years ago
0
Option to retry a task when execution fails
#51
uniqueg
opened
2 years ago
1
GA4GH Tool Registry Service with cwl-tes support
#50
superbsky
opened
3 years ago
0
Expanding S3/GS support [WIP]
#49
kellrott
opened
3 years ago
0
Updating testing
#48
kellrott
closed
3 years ago
0
Fix isfile
#47
manabuishii
closed
3 years ago
2
Fix to add path to listdir result
#46
manabuishii
closed
3 years ago
4
Wrong input when using directory type in tests
#45
lvarin
opened
3 years ago
1
maxCores set to local CPU count
#44
mr-c
opened
3 years ago
2
allow weak ciphers, if needed
#43
mr-c
opened
3 years ago
10
Recent FTP changes cause an error for glob outputs with *
#42
aniewielska
opened
4 years ago
3
AWS support
#41
kmavrommatis
opened
4 years ago
2
(Try to) Fix tests, drop Python 2.7, 3.5; add 3.8
#40
jvkersch
closed
4 years ago
0
weird patches to make things work with mac docker
#39
jjenthought
closed
4 years ago
2
ENH: S3 backend
#38
jvkersch
opened
4 years ago
4
FTP has issues with username & password on non-secure protocol
#37
Dabrill
closed
4 years ago
0
Use hostname instead of netloc when connecting to FTP?
#36
jvkersch
closed
3 years ago
0
Option to connect to insecure FTP?
#35
jvkersch
closed
3 years ago
0
AWS s3 support
#34
kmavrommatis
opened
4 years ago
8
Added importable function to use in external python modules
#33
medcelerate
opened
4 years ago
4
V0.3.0
#32
adamstruck
closed
4 years ago
1
Get error argument required when trying to submit
#31
medcelerate
opened
4 years ago
2
Fix travis-ci errors
#30
adamstruck
closed
5 years ago
1
Oauth support
#29
uniqueg
closed
5 years ago
7
Move cwl-tes repo to a different organization?
#28
mr-c
closed
5 years ago
17
Add support for OAuth2 Bearer tokens
#27
juhtornr
closed
5 years ago
2
cwl-tes execution to remote server
#26
fgypas
opened
6 years ago
5
WIP: initial support for ftp locations
#25
mr-c
closed
5 years ago
26
running system tools with cwl-tes
#24
gunjanhariani
closed
6 years ago
2
Don't preserve PATH environment variable by default
#23
mr-c
closed
6 years ago
0
Switch to Python 3.6 or 3.7?
#22
mr-c
closed
1 month ago
4
[WIP] freshen cwltool, cwltest versions
#21
mr-c
closed
6 years ago
5
Input download not supported by storage
#20
azat-badretdin
closed
6 years ago
3
feature: use tox for testing
#19
psafont
closed
6 years ago
9
How to run the nose tests?
#18
psafont
closed
6 years ago
2
Which funnel version?
#17
jasper1918
closed
6 years ago
4
updates to use new cwltool code and bump funnel version for testing
#16
adamstruck
closed
6 years ago
7
cwltool version 1.0.20180108222053
#15
adamstruck
closed
6 years ago
0
Support TES v0.3
#14
adamstruck
closed
6 years ago
0
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