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omero-metadata
OMERO plugin for metadata manipulation https://www.openmicroscopy.org/omero/
GNU General Public License v2.0
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Add tablename option
#86
dominikl
opened
1 week ago
1
Integration tests: call pytest directly
#85
sbesson
closed
6 months ago
1
Fix flake8 issue raised following the Rocky Linux 9 image upgrade
#84
sbesson
closed
8 months ago
12
Remove mox3 test dependency
#83
sbesson
closed
8 months ago
2
Update ParsingContext.parse() to return the ID of the table
#82
sbesson
closed
1 year ago
3
Support import of ROIs by Roi Name for dataset/project & screen/plate levels
#81
JensWendt
opened
1 year ago
2
Only perform header detection when --file is specified
#80
sbesson
closed
1 year ago
5
Remove leading whitespaces from csv
#79
dominikl
closed
8 months ago
20
"Nothing to do during post processing." from info to debug
#78
emilroz
closed
2 years ago
1
Fix header detection for tables with sparse numerical data
#77
sbesson
closed
2 years ago
4
Header detection: default behavior and handling sparse columns
#76
sbesson
closed
2 years ago
2
Added column type tests
#75
muhanadz
closed
2 years ago
3
Refactor pandas-based header detection
#74
sbesson
opened
2 years ago
0
Migrate reference documentation to readthedocs
#73
sbesson
opened
2 years ago
0
Automatic header detection tests
#72
muhanadz
closed
2 years ago
0
Updating README
#71
muhanadz
closed
2 years ago
12
Skip empty rows
#70
dominikl
closed
2 years ago
2
populate metadata set namespace on OMERO.table annotation
#69
will-moore
opened
2 years ago
1
Bug in Exception Message for duplicate Image names
#68
JensWendt
closed
2 years ago
2
Add --detect_header and DatasetColumn support
#67
muhanadz
closed
2 years ago
21
Add Image IDs workflow to README
#66
will-moore
closed
2 years ago
6
Support Dataset IDs and Image IDs when target is Project
#65
will-moore
opened
2 years ago
1
Support images_by_name for Screen and Plate
#64
will-moore
opened
2 years ago
16
Importing plate data per image
#63
abhamacher
opened
2 years ago
1
Support ROI table on Dataset, for table with ROI ID column
#62
will-moore
closed
2 years ago
40
Add table_name option to ParsingContext()
#61
will-moore
closed
3 years ago
3
add allow_nan flag to context
#60
jburel
closed
3 years ago
1
Regression caused by NaN support
#59
sbesson
closed
3 years ago
1
Roi name allowed none
#58
will-moore
closed
3 years ago
11
OMERO table space in column name
#57
jburel
opened
3 years ago
8
Use 'Roi' for name of RoiColumn
#56
will-moore
closed
3 years ago
13
Prevent users from creating columns with python keyword names
#55
kkoz
opened
3 years ago
3
Close callbacks
#54
joshmoore
closed
3 years ago
1
Nan values for bulk annotation tables
#53
will-moore
closed
3 years ago
6
Add deletebulkanns
#52
manics
closed
3 years ago
5
populate command fails if the target is a plate and the CSV contains a plate column
#51
pwalczysko
opened
3 years ago
9
Create omero_plugin.yml
#50
sbesson
closed
3 years ago
0
populate metadata at image-level
#49
erindiel
closed
3 years ago
6
Add some linting checks to CSVs
#48
manics
opened
3 years ago
1
Add dependency on version 5.8 or more recent of omero-py
#47
sbesson
closed
3 years ago
1
Fix usage --report option in the omero-metadata CLI plugin
#46
sbesson
closed
3 years ago
1
bulkmap populate step fails in non-default group
#45
pwalczysko
opened
4 years ago
1
default idr workflows fail in outreach situation
#44
pwalczysko
opened
4 years ago
6
Deploy sdist and bdist_wheel from travis
#43
jburel
closed
4 years ago
0
remove bin/omero
#42
jburel
closed
4 years ago
0
Define jinja2 as a requirement of omero-metadata
#41
sbesson
closed
4 years ago
1
Improved support for annotations with Unicode characters
#40
sbesson
closed
4 years ago
5
Handle byte-order-mark (BOM) gracefully
#39
manics
closed
4 years ago
1
Don't require user to manually set PLUGIN
#38
manics
closed
4 years ago
0
Add missing -k test-string to pytest
#37
manics
closed
4 years ago
1
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