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openvax
/
mhcflurry
Peptide-MHC I binding affinity prediction
http://openvax.github.io/mhcflurry/
Apache License 2.0
191
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[request]: update Docker image to version 2.1.2
#242
tamuanand
closed
1 week ago
1
Bump actions/download-artifact from 2 to 4.1.7 in /.github/workflows
#241
dependabot[bot]
closed
1 week ago
0
Remove upper bound on tensorflow
#240
jday1
closed
1 week ago
3
Introduced tf-keras for compatibility with tensorflow>2.15
#239
jday1
closed
2 months ago
3
Data issues in Data_S3.csv (BA predictor training data)
#238
elonp
opened
3 months ago
4
parallel computing
#237
tianlt
closed
3 months ago
1
Documentation outdated
#236
rojalator
opened
5 months ago
2
Set upper limit on tensorflow version. Fixes #234
#235
timodonnell
closed
6 months ago
1
Tensorflow 2.16.1 compatibility
#234
Stikus
closed
6 months ago
5
How to configure models path?
#233
WShaoLab
closed
6 months ago
3
How to load own model
#232
YiwenAI
closed
6 months ago
4
use pytest-cov
#231
iskandr
closed
7 months ago
0
mhcflurry-downloads fetch models_class1_presentation error
#230
Ailefeila
closed
10 months ago
0
mhcflurry-predict INPUT.csv –out RESULT.csv
#229
lzy604
closed
6 months ago
1
Update datasets
#228
timodonnell
closed
10 months ago
0
Fix LSUV initialization
#227
timodonnell
closed
11 months ago
0
Add PyPI (and testpypi) release github actions. Bump version to 2.1.0
#226
timodonnell
closed
11 months ago
0
Change mhcflurry-predict-scan-semantics
#225
timodonnell
closed
11 months ago
0
Fix docker build
#224
timodonnell
closed
11 months ago
0
github workflow for CI
#223
walid0925
closed
11 months ago
1
upgrade deps
#222
walid0925
closed
11 months ago
0
Use yaml.safe_load()
#221
timodonnell
closed
12 months ago
0
MSE Loss with Inequalities Denominator
#220
kaboroevich
closed
1 year ago
2
A question about the '--threshold-affinity' parameter
#219
chenli-bioinfo
closed
11 months ago
1
is it possible to use mhcflurry for fish mhc prediction?
#218
najibveto
closed
11 months ago
1
test failures
#217
samuela
closed
11 months ago
1
where is the np-utils dependency used?
#216
samuela
closed
12 months ago
1
Use yaml.safe_load for training scripts
#215
ernesto-elsaesser
closed
12 months ago
1
input.csv
#214
lzy604
closed
1 year ago
1
mhcflurry-downloads fetch random_peptide_predictions --already-downloaded-dir
#213
paulsonzhang
closed
1 year ago
3
MHC Class II support?
#212
PhilPalmer
closed
1 year ago
1
Update mhcflurry on bioconda
#211
jonasscheid
closed
1 year ago
7
discrepancy with running mhcflurry-predict on not supported alleles
#210
liviatran
opened
1 year ago
6
Project dependencies may have API risk issues
#209
PyDeps
closed
11 months ago
1
excessive warnings generated from tensorflow due to deprecation of Model.state_updates
#208
jgbaum
opened
1 year ago
3
about training
#207
ghost
closed
2 years ago
0
about trainning
#206
ghost
closed
2 years ago
0
Error : peptides have non standard amino acids
#205
rohan-bareja-turnstone
opened
2 years ago
2
LSUV init fails with tensorflow>2.2
#204
ikizhvatov
closed
11 months ago
2
Parsing error when using Class1PresentationPredictor
#203
liliblu
closed
11 months ago
2
error when using MHCflurry
#202
robertoimuno
closed
2 years ago
7
Use new mhcgnomes (0.8.4)
#201
iskandr
closed
2 years ago
2
Version 2.0.5
#200
timodonnell
closed
2 years ago
0
Non-standard amino acids (e.g. U for selenocysteine) result in failure in mhcflurry-predict-scan even when --no-throw passed
#199
Hilly20211122
closed
2 years ago
2
Small fix percent rank renormalization
#198
timodonnell
closed
3 years ago
0
Fix class1_presentation_predictor.py for latest pandas
#197
timodonnell
closed
3 years ago
0
Version 2.0.3
#196
timodonnell
closed
3 years ago
0
Missing 'mhcflurry_affinity_percentile' values in v2.0.2 output
#195
abyssum
closed
3 years ago
2
moving the directory for models_class1_presentation not posssible
#194
aubreybailey
closed
3 years ago
2
Difference between "affinity_percentile" and "presentation_percentile"
#193
ShanWeera
closed
3 years ago
1
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