owlcollab oboformat issues

owlcollab / oboformat

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issues

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values in trailing modifiers can't have datatypes

#151 balhoff opened 1 month ago
0
Use SPARQL production rules for prefixed and unprefixed identifiers

#150 althonos opened 4 months ago
3
Escaping for URL-as-ID is inconsistent with IRIs

#149 althonos opened 4 months ago
1
Qualifier syntax is ambiguous for IRI identifiers and inconsistent

#148 althonos opened 4 months ago
0
oboformat loader should generated subAnnotationPropertyOf when is_a is used between Typedefs with is_metadata_tag

#147 cmungall opened 7 months ago
0
Create a comprehensive oboformat compliance test suite

#146 cmungall opened 7 months ago
0
owl-axioms should not need to be wrapped in `Ontology(...)`

#145 cmungall opened 7 months ago
0
Annotation assertions should not show up as relationship tags

#144 cmungall opened 10 months ago
0
Breaking issue regarding annotation property 'see also' in Uberon

#143 ghost opened 11 months ago
10
is_inferred should output xsd:boolean, not xsd:string annotation

#142 matentzn opened 11 months ago
0
1.6: don't inject `oboInOwl:id` annotations

#141 balhoff opened 11 months ago
0
Faulty interaction between IAO:0000231 and replaced_by

#140 matentzn opened 11 months ago
3
Support individuals as values of annotations

#139 matentzn closed 11 months ago
2
1.6: make tag ordering part of normative specification, not informative

#138 cmungall opened 1 year ago
3
1.6: consider making annotations always property values, and 'relation' tags only for semantic relations (existential or universal restriction)

#137 balhoff opened 1 year ago
0
1.6: Allow domain, range, is-a for annotation properties (alternative to #135)

#136 cmungall opened 1 year ago
0
1.6: New Typedef field: value_type

#135 cmungall opened 1 year ago
0
1.6: Automatically create additional generic property values for multiple names, definitions, etc.

#134 cmungall opened 1 year ago
1
1.6: Adopt Turtle grammar for IRIs, CURIEs, literals

#133 cmungall opened 1 year ago
1
1.6: Clarify use of idspace as a mechanism for controlling CURIE expansion and persist these as shacl triples

#132 cmungall opened 1 year ago
0
Multiple equivalent class axioms for a single term are merged in OBO output

#131 cmungall opened 1 year ago
0
Use of Annotation Properties for subsets and synonymtypes is non-intuitive

#130 cmungall opened 1 year ago
0
Subsets and synonym types have hash-based URIs by default

#129 cmungall opened 1 year ago
0
Boolean values in axiom annotations become strings

#128 cmungall opened 1 year ago
1
No standard way to handle metadata cardinality issues

#127 cmungall opened 1 year ago
0
no support for internationalization

#126 cmungall opened 1 year ago
1
Properties in axiom annotations always get wrong IRI

#125 cmungall closed 1 year ago
1
alt_ids are confusing

#124 cmungall opened 1 year ago
0
consider/replaced_by values are always turned into CURIE strings

#123 cmungall opened 1 year ago
0
Preparation for 1.6

#122 cmungall opened 1 year ago
0
unable to convert owl format to obo

#121 lmanchon closed 2 years ago
1
Fix mapping of `is_metadata_tag(true)` typedefs to annotation properties

#120 althonos closed 2 years ago
2
relationship-Tag question

#119 mwalzer opened 4 years ago
1
Question about using terms from external obo ontologies

#118 fanavarro closed 4 years ago
2
Fix translation symbols in section 5.1

#117 althonos opened 4 years ago
0
OWL axioms semantics need clarification

#116 althonos opened 5 years ago
0
Question about synonym format

#115 fanavarro closed 5 years ago
2
Question about trailing modifiers format

#114 fanavarro closed 5 years ago
2
Add `all_some` and `all_only` to untranslated qualifiers

#113 althonos opened 5 years ago
0
Remove Definitional Expressions

#112 althonos opened 5 years ago
0
Make `xref` use `oboInOwl` annotation property

#111 althonos closed 5 years ago
0
Redefine `oboInOwl:hasDbXref` to be a `rdfs:seeAlso` sub-property

#110 althonos opened 5 years ago
0
Avoid using `rdfs:comment` to translate `comment` and `remark` clauses

#109 althonos opened 5 years ago
0
Use `dc:description` instead of IAO_0000115

#108 althonos opened 5 years ago
3
Use Dublin Core properties in common entity clause translation

#107 althonos closed 5 years ago
1
Better factorization of production rules for ontology IRIs

#106 althonos opened 5 years ago
0
Improve management of property values datatypes

#105 althonos opened 5 years ago
0
Explicitly support `namespace-id-rule` header clause

#104 althonos opened 5 years ago
0
Add `remark` to clause translation table of `obo-syntax.html`

#103 althonos closed 5 years ago
0
Fix styling of `SynonymType-ID` rule in spec

#102 althonos closed 5 years ago
0