pacific-hake hake-assessment issues

pacific-hake / hake-assessment

:zap: :fish: Build the assessment document using latex and knitr

MIT License

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issues

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Blank page before Figures section

#1109 cgrandin closed 10 months ago
8
Fit table 33 on the landscape page

#1108 cgrandin closed 10 months ago
0
citreproc ref not found

#1107 cgrandin closed 10 months ago
2
Previous year's biomass not correct

#1106 andrew-edwards closed 10 months ago
14
Bridging model final relative biomass plot does not agree with base model plot

#1105 andrew-edwards closed 10 months ago
6
Understanding increase in 1980 recruitment from last year's assessment

#1104 andrew-edwards closed 10 months ago
4
Come up with a better way to do `bridge_model_end_yr`

#1103 cgrandin opened 10 months ago
2
Update oceanographic conditions regarding age-1 index in 3.4.2 Model Fit subsection

#1102 andrew-edwards closed 10 months ago
5
Priors in Figures 21 and 22 (prior and post plots) are a bit Etch-a-Sketch-y (and thus misleading)

#1101 andrew-edwards closed 10 months ago
2
`can_ages_lst` data object should be deprecated I think

#1100 andrew-edwards closed 10 months ago
1
Update plot-biomass figure function to include plot unfished SSB option

#1099 aaronmberger-nwfsc closed 10 months ago
11
Could sample MCMC samples for the plotting parts of the pairs plots in MCMC diagnostics appendix

#1098 andrew-edwards closed 10 months ago
1
Remove keyposteriors.csv and nuisanceposteriors.csv from the project

#1097 cgrandin closed 10 months ago
2
Each person add new appendix line to their local _bookdown.yml

#1096 andrew-edwards closed 10 months ago
0
Resolution - should use 300 dpi but can stick with 100 dpi for now

#1095 andrew-edwards closed 10 months ago
3
2.5.2 Steepness Chantel Wetzel

#1094 kellijohnson-NOAA closed 10 months ago
3
base_model$mcmcparams is `NULL`

#1093 kellijohnson-NOAA closed 10 months ago
1
Bridge model plots are becoming illegible. How do we deal with it?

#1092 cgrandin closed 10 months ago
2
El Ni\~no is not rendering

#1091 kellijohnson-NOAA closed 10 months ago
1
Information about polish surveys

#1090 kellijohnson-NOAA closed 10 months ago
0
Information about U.S. observer coverage

#1089 kellijohnson-NOAA closed 10 months ago
0
Databases for Canadian data might need updated in text

#1088 kellijohnson-NOAA closed 10 months ago
2
Format the Appendix from Eric on time-varying maturity

#1087 andrew-edwards closed 10 months ago
1
`last_yr_us_rank undefined`

#1086 cgrandin closed 10 months ago
0
Update Canadian economic information

#1085 kellijohnson-NOAA closed 10 months ago
1
Plot survey index fits (bars)

#1084 cgrandin closed 10 months ago
1
Need the NOAA disclaimer on the front page.

#1083 andrew-edwards closed 10 months ago
1
Checking that at least one person has carefully read each section once we have the new results

#1082 andrew-edwards closed 10 months ago
2
Keeping track of who has carefully read each section

#1081 andrew-edwards closed 10 months ago
7
Need letter size paper not A4

#1080 andrew-edwards closed 10 months ago
7
Remove `hake::` when not needed, as it will use library version not the local version; need to keep some though.

#1079 andrew-edwards closed 10 months ago
7
Make sure figure/table captions don't have abbreviations

#1078 cgrandin closed 10 months ago
0
Cannot have \usepackage....[hyperref] and \hypersetup

#1077 andrew-edwards closed 10 months ago
5
Need more exports from kableExtra

#1076 kellijohnson-NOAA closed 10 months ago
0
Lack of input uncertainty for survey data

#1075 kellijohnson-NOAA closed 10 months ago
8
"Observed" CPUE may not be the full time series in model 1

#1074 kellijohnson-NOAA closed 10 months ago
2
Adds GGally to DESCRIPTION

#1073 kellijohnson-NOAA closed 11 months ago
2
fix: Quote the path

#1072 kellijohnson-NOAA closed 11 months ago
0
fix: Changes ss_2024 to ss3_2024

#1071 kellijohnson-NOAA closed 11 months ago
0
SRG Request 2dAR selectivity

#1070 kellijohnson-NOAA opened 1 year ago
1
SRG Request bootstrap sample sizes

#1069 kellijohnson-NOAA opened 1 year ago
1
SRG Request Canadian sampling of more tows but fewer fish

#1068 kellijohnson-NOAA closed 10 months ago
2
SRG Request Age-1 index CVs

#1067 kellijohnson-NOAA opened 1 year ago
2
SRG Request Age-1 index distribution modelling zero value

#1066 kellijohnson-NOAA closed 10 months ago
1
SRG Request time-varying maturity

#1065 kellijohnson-NOAA closed 10 months ago
1
SRG Request CPUE analysis

#1064 kellijohnson-NOAA opened 1 year ago
1
SRG Request natural mortality

#1063 kellijohnson-NOAA closed 10 months ago
1
SRG Request for dynamic unfished spawning biomass

#1062 kellijohnson-NOAA closed 10 months ago
2
SRG Request sensitivities

#1061 kellijohnson-NOAA closed 10 months ago
2
Tracking abnormal changes in oceanography and fishing

#1060 aaronmberger-nwfsc closed 10 months ago
1

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