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paulsengroup
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2022-mcf10a-cancer-progression
Data analysis code for: "Loss of multi-level 3D genome organization during breast cancer progression" (preprint available soon)
MIT License
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Bump curlimages/curl from 8.1.0 to 8.10.0 in /containers
#119
dependabot[bot]
opened
1 day ago
0
Bump mambaorg/micromamba from 1.4.3 to 1.5.9 in /containers
#118
dependabot[bot]
opened
1 week ago
0
Bump docker/build-push-action from 4 to 6
#117
dependabot[bot]
closed
1 month ago
1
Bump fedora from 38 to 40 in /containers
#116
dependabot[bot]
closed
1 month ago
1
Bump ubuntu from 22.04 to 24.04 in /containers
#115
dependabot[bot]
closed
1 month ago
1
Bump curlimages/curl from 8.1.0 to 8.9.1 in /containers
#114
dependabot[bot]
closed
1 month ago
1
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230501 to 20240318 in /containers
#113
dependabot[bot]
closed
1 month ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.5.8 in /containers
#112
dependabot[bot]
closed
1 month ago
1
Update README
#111
robomics
closed
1 month ago
0
Update downloads.tsv with permanent links
#110
robomics
opened
1 month ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.5.3 in /containers
#109
dependabot[bot]
closed
1 month ago
1
Bump fedora from 38 to 39 in /containers
#108
dependabot[bot]
closed
1 month ago
1
Bump curlimages/curl from 8.1.0 to 8.4.0 in /containers
#107
dependabot[bot]
closed
1 month ago
1
Bump curlimages/curl from 8.1.0 to 8.3.0 in /containers
#106
dependabot[bot]
closed
11 months ago
1
Bump docker/setup-buildx-action from 2 to 3
#105
dependabot[bot]
closed
1 month ago
1
Bump docker/login-action from 2 to 3
#104
dependabot[bot]
closed
1 month ago
1
Bump docker/build-push-action from 4 to 5
#103
dependabot[bot]
closed
1 month ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.5.1 in /containers
#102
dependabot[bot]
closed
10 months ago
1
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230501 to 20230905 in /containers
#101
dependabot[bot]
closed
1 month ago
1
Bump actions/checkout from 3 to 4
#100
dependabot[bot]
closed
1 month ago
1
Add bioframe to HiCExplorer Dockerfile
#99
robomics
closed
1 year ago
0
Bump mambaorg/micromamba from 1.4.3 to 1.5.0 in /containers
#98
dependabot[bot]
closed
1 year ago
1
100 Chrom3D models
#97
mooshagh
closed
1 year ago
0
Add workflow to detect structural variants
#96
robomics
closed
1 year ago
0
Bump curlimages/curl from 8.1.0 to 8.2.1 in /containers
#95
dependabot[bot]
closed
1 year ago
1
Bump curlimages/curl from 8.1.0 to 8.2.0 in /containers
#94
dependabot[bot]
closed
1 year ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.4.9 in /containers
#93
dependabot[bot]
closed
1 year ago
2
Bump mambaorg/micromamba from 1.4.3 to 1.4.8 in /containers
#92
dependabot[bot]
closed
1 year ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.4.7 in /containers
#91
dependabot[bot]
closed
1 year ago
1
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230501 to 20230707 in /containers
#90
dependabot[bot]
closed
1 year ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.4.6 in /containers
#89
dependabot[bot]
closed
1 year ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.4.5 in /containers
#88
dependabot[bot]
closed
1 year ago
1
Update Chrom3D configuration
#87
mooshagh
closed
1 year ago
0
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230501 to 20230625 in /containers
#86
dependabot[bot]
closed
1 year ago
1
Bump mambaorg/micromamba from 1.4.3 to 1.4.4 in /containers
#85
dependabot[bot]
closed
1 year ago
1
Bump curlimages/curl from 8.1.0 to 8.1.2 in /containers
#84
dependabot[bot]
closed
1 year ago
1
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230501 to 20230602 in /containers
#83
dependabot[bot]
closed
1 year ago
1
Bump curlimages/curl from 8.1.0 to 8.1.1 in /containers
#82
dependabot[bot]
closed
1 year ago
1
Bump bedtools to v2.31.0
#81
robomics
closed
1 year ago
0
Bump curlimages/curl from 7.88.1 to 8.1.0 in /containers
#80
dependabot[bot]
closed
1 year ago
0
Address several version compatibility issues in Dockerfiles
#79
robomics
closed
1 year ago
0
Bump micromamba to v1.4.3
#78
robomics
closed
1 year ago
0
Update hic-balancing Dockerfile
#77
dependabot[bot]
closed
1 year ago
0
Bump paulsengroup/ci-docker-images/ubuntu-22.04-cxx-clang-15 from 20230406 to 20230424 in /containers
#76
dependabot[bot]
closed
1 year ago
1
Bugfix
#75
robomics
closed
1 year ago
0
Fix typo in downloads.tsv
#74
robomics
closed
1 year ago
0
Bump fedora from 37 to 38 in /containers
#73
dependabot[bot]
closed
1 year ago
0
Update fetch_data workflow and downloads.tsv
#72
robomics
closed
1 year ago
0
Update base configs for SAGA and hovig
#71
robomics
closed
1 year ago
0
Update nfcore/hic to v2.0.0
#70
robomics
closed
1 year ago
0
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