paulshuker / coppafish

COmbinatorial Padlock-Probe-Amplified Fluorescence In Situ Hybridization

https://paulshuker.github.io/coppafish/

MIT License

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bioinformatics biostatistics science-research transcriptomics

readme

coppafish

GitHub Tag GitHub License

Documentation

Homepage
- Installation
- Updating
Usage
- Input data
- Running
Method
- Scale
- Extract
- Filter
- Find spots
- Register
- Stitch
- Call spots
- OMP
Diagnostics
Advanced Usage
Troubleshoot
Glossary

For more information on coppafish's method, please see the documentation here (some of this information will be outdated).