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pbs-assess
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sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
https://pbs-assess.github.io/sdmTMB/
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Error in applying visreg to fitted model
#366
mdmazur
opened
2 days ago
3
make_mesh cryptic fail when NA in coordinates
#365
lionel-ign
opened
4 days ago
1
NA/NaN gradient evaluation issue encountered when running the sdmTMB using Beta family
#364
xiacong2019
opened
4 days ago
3
Problem in SVC vignette
#363
joshcullen
closed
1 week ago
6
Multispecies / multiresponse vignette
#361
ericward-noaa
opened
2 weeks ago
0
tidy with exponentiate = TRUE returns CIs based on already exponentiated estimate
#353
maxlindmark
closed
2 months ago
1
Fix coef() to work with delta models
#351
ericward-noaa
opened
2 months ago
0
Predictions for `truncated_nbinom2` models
#350
tom-peatman
closed
2 months ago
10
Add effective area occupied calculations in .cpp
#348
seananderson
closed
2 months ago
1
Allow the 'area' argument to take a column name
#347
seananderson
opened
3 months ago
0
Add cli progress bars where appropriate
#346
seananderson
opened
3 months ago
0
Drop the 'proj' section of the .cpp template
#345
seananderson
opened
3 months ago
0
Update README.Rmd
#344
francisvolh
closed
3 months ago
2
Release sdmTMB 0.6.0
#343
seananderson
closed
3 months ago
0
Predictions with new data from delta models with random intercepts
#342
tom-peatman
closed
3 months ago
3
fix delta-gamma binomial link for type = 'poisson-link'
#340
jdunic
closed
3 months ago
0
Expanding abundance when fitting Bernoulli-cloglog model
#339
James-Thorson-NOAA
opened
4 months ago
2
get_index() over alternate time variable?
#338
seanhardison1
closed
4 months ago
3
Add names of random effects in tidy()
#337
seananderson
opened
4 months ago
1
Simplify extra time implementation
#336
seananderson
closed
4 months ago
0
Fix prediction with newdata = NULL for non-delta models with extra_time
#335
seananderson
closed
4 months ago
0
get_index potential computation issues for very large prediction grids
#334
Lewis-Barnett-NOAA
opened
4 months ago
7
Add gengamma rqr
#333
jdunic
closed
4 months ago
0
Simplify extra time implementation
#329
seananderson
closed
4 months ago
0
`mvn-laplace` residual estimation fails due to `predict.sdmTMB()` offset issue
#326
sebpardo
closed
5 months ago
0
Release sdmTMB 0.5.0
#325
seananderson
closed
5 months ago
1
Abs (gradients)
#324
ericward-noaa
closed
5 months ago
1
Make get_index() smarter about extra time slices and area argument
#323
seananderson
closed
5 months ago
2
Add RMSE and MAE sdmTMB_cv examples to cross validation vignette
#322
seanhardison1
opened
5 months ago
3
loosen residual test tolerance slightly
#321
bbolker
closed
5 months ago
1
Rename time column internally to protect against extra_time + as.factor conflict
#320
Lewis-Barnett-NOAA
closed
5 months ago
2
Add tidy to sdmTMB_cv
#319
ericward-noaa
opened
5 months ago
0
Add argument to _mix() families for fixed proportion?
#318
seananderson
opened
6 months ago
1
Update Bayesian vignette to note Jacobian adjustments and how to enable those
#316
seananderson
opened
6 months ago
0
Adding `getsd = TRUE` to `sdmTMBcontrol`
#311
James-Thorson-NOAA
closed
6 months ago
2
hardcode log-log link in clean name for type= "poisson-link"
#309
Lewis-Barnett-NOAA
closed
5 months ago
1
poisson-link does not confer correct combination of link functions
#308
Lewis-Barnett-NOAA
closed
6 months ago
1
Release sdmTMB 0.4.3
#303
seananderson
closed
6 months ago
6
Computational scaling with large datasets, especially for Tweedie
#302
seananderson
closed
5 months ago
0
Add new message about time
#299
ericward-noaa
closed
6 months ago
0
MCMC samples don't work with `extra_time`
#297
ericward-noaa
closed
7 months ago
1
Add `verbose` to check.R
#296
ericward-noaa
closed
7 months ago
0
text edits to standardize reference formats
#295
Lewis-Barnett-NOAA
closed
7 months ago
0
Implementing standard curve models for eDNA applications
#292
ericward-noaa
opened
7 months ago
0
Add `type` argument to delta families
#290
seananderson
closed
5 months ago
2
Release sdmTMB 0.4.2
#289
seananderson
closed
7 months ago
1
NA/NaN gradient evaluation error encountered when running sdmTMB function with spatial `on`
#288
davjfish
opened
7 months ago
22
Push an update to CRAN to force binary rebuilds
#287
seananderson
closed
7 months ago
1
Gengamma
#286
James-Thorson-NOAA
closed
5 months ago
3
Add check in predict() that spatial coordinates are within the fitted coordinates
#285
seananderson
closed
5 months ago
0
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