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plevritis-lab
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CELESTA
Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information for multiplexed in situ imaging data. No training dataset with cell type labels is required.
Apache License 2.0
30
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11
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Cell assignment bug in second and later rounds
#25
Sz-Jason-Chen
opened
5 months ago
0
Fix bug related to subsetting columns from dataframe
#24
DanInci
opened
7 months ago
0
AssignCells user input thresholds
#23
mcaponegro
opened
7 months ago
0
NAs are not allowed in subscripted assignments
#22
HelgaBergholtz
opened
8 months ago
1
Command line interface for CELESTA
#21
LukasHats
closed
8 months ago
0
Inconsistency between `prior_marker_info.csv` and `imaging_data.csv` cell type assignments
#20
asom
opened
1 year ago
1
Error with CreateCelestaObject
#19
HMgalloway
opened
1 year ago
1
Error in AssignCells function
#18
asasama12
opened
1 year ago
13
fix-bugs-Jan2023
#17
weiruo16
closed
1 year ago
0
Fix some bugs related to index out of bound
#16
weiruo16
closed
1 year ago
0
fix bugs and add clarification messages
#15
weiruo16
closed
2 years ago
0
pass in bandwidth argument to GetNeighborInfo
#14
dan11mcguire
closed
2 years ago
1
subscript out of bounds
#13
afshinmoradi
opened
2 years ago
7
NAs error
#12
afshinmoradi
opened
2 years ago
4
Fix Bug? in FindCellsToCheck causing return of NAs in unassigned_cells and causes errors downstream
#11
andrewjUTSW
closed
1 year ago
3
Edit readme file
#10
weiruo16
closed
2 years ago
0
Edited the readme file
#9
weiruo16
closed
2 years ago
0
Merge changes in CELESTA-edit_readme into the main
#8
weiruo16
closed
2 years ago
0
Add progress to create CELESTA
#7
tassicalim
closed
2 years ago
0
Add unknown cell plotting
#6
tassicalim
closed
2 years ago
0
Reverse unknown plotting
#5
tassicalim
closed
2 years ago
0
Update README
#4
tassicalim
closed
2 years ago
0
Update FitGmmModel
#3
tassicalim
closed
2 years ago
0
Apply changes for Shiny app compatibility
#2
tassicalim
closed
2 years ago
0
Clean up styling
#1
tassicalim
closed
2 years ago
0