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pni-lab
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PUMI
PUMI: neuroimaging Pipelines Using Modular workflow Integration
https://pumi.readthedocs.io/en/latest/
GNU General Public License v3.0
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"despiking_afni" does not generate QC images
#91
khoffschlag
opened
2 years ago
0
Discuss and integrate "mist_labels" and "mist_modules"
#90
khoffschlag
opened
2 years ago
0
Port "extract_timeseries_nativespace"
#89
khoffschlag
closed
1 year ago
0
Port "atlas2func"
#88
khoffschlag
closed
1 year ago
0
Port "PickAtlas"
#87
khoffschlag
closed
1 year ago
0
Port "FuncProc_despike_afni"
#86
khoffschlag
closed
2 years ago
1
Port "datacens_workflow_threshold"
#85
khoffschlag
closed
2 years ago
0
Port "tmpfilt_workflow"
#84
khoffschlag
closed
2 years ago
0
Port "nuissremov_workflow"
#83
khoffschlag
closed
2 years ago
0
Port "compcor_workflow"
#82
khoffschlag
closed
2 years ago
0
Port "concat_workflow"
#81
khoffschlag
closed
2 years ago
0
Port "fMRI2QC"
#80
khoffschlag
closed
1 year ago
0
Port "create_anat_noise_roi_workflow"
#79
khoffschlag
closed
2 years ago
0
BidsPipeline
#78
mhmadAbs
closed
2 years ago
0
- Defacing example using BidsPipeline Decorator
#77
mhmadAbs
closed
2 years ago
0
BidsPipeline Format
#76
mhmadAbs
closed
1 year ago
0
Create LICENSE
#75
spisakt
closed
2 years ago
0
Add references
#74
khoffschlag
closed
2 years ago
0
64 de facing
#73
mhmadAbs
closed
2 years ago
0
Let the user pick the volume?
#72
khoffschlag
opened
2 years ago
1
Output documentation missing for bbr (func_to_anat)
#71
khoffschlag
opened
2 years ago
0
merge the port of AnatProc
#70
khoffschlag
closed
2 years ago
0
reorientation-step is missing in some example-scripts
#69
khoffschlag
opened
2 years ago
0
templateflow missing in requirements.txt
#68
khoffschlag
closed
2 years ago
0
Port vol2png
#67
khoffschlag
closed
2 years ago
0
Port AnatProc
#66
khoffschlag
closed
2 years ago
0
integrate carpet plot
#65
khoffschlag
closed
1 year ago
1
De-facing
#64
spisakt
opened
2 years ago
1
62 base
#63
mhmadAbs
closed
2 years ago
4
BET with Functional Data
#62
mhmadAbs
opened
2 years ago
0
core enhancement: default fields as workflow peoperties?
#61
spisakt
opened
2 years ago
0
59-create despiking workflow and end-user script.
#60
mhmadAbs
closed
2 years ago
1
create despiking workflow and end-user script
#59
mhmadAbs
closed
2 years ago
0
add porting-notes to the documentation
#58
khoffschlag
opened
2 years ago
0
56 testen
#57
mhmadAbs
closed
2 years ago
0
Test
#56
mhmadAbs
closed
2 years ago
0
remove output_dir from example scripts
#55
khoffschlag
opened
2 years ago
0
add **kwargs
#54
khoffschlag
opened
2 years ago
0
discuss qc naming conventions
#53
khoffschlag
opened
2 years ago
0
discuss place of the function "ants_hardcoded"
#52
khoffschlag
opened
2 years ago
0
remove unused inputspec fields in bet_fsl
#51
khoffschlag
closed
2 years ago
0
integrate fsl tissue segmentation, revise qc methods and qc sinking
#50
khoffschlag
closed
2 years ago
0
use nilearn to create qc images
#49
khoffschlag
closed
2 years ago
0
qc-pipelines can only sink png files
#48
khoffschlag
closed
2 years ago
0
remove unnecessary (and unused) inputspec fields in bet_fsl
#47
khoffschlag
closed
2 years ago
0
integrate ants standardisation
#46
khoffschlag
closed
2 years ago
1
Add exception(s) to HD-Bet interface
#45
khoffschlag
opened
3 years ago
0
set output type of reorient in ex_anat2mni.py
#44
khoffschlag
closed
2 years ago
0
Update Dockerfile
#43
khoffschlag
closed
2 years ago
1
add fallback for fnirt config
#42
khoffschlag
closed
3 years ago
0
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