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pnnl
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leapR
BSD 3-Clause "New" or "Revised" License
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Fix implementation of 'minsize' restriction for enrichment_in_sets (Script: enrichment_in_groups.R)
#43
HarkiratSohi
opened
1 year ago
1
Revert "Fix enrichment in groups sohi"
#42
sgosline
closed
1 year ago
0
Fix enrichment in groups sohi
#41
HarkiratSohi
closed
1 year ago
0
Update enrichment_in_groups.R
#40
CamiloPosso
closed
1 year ago
0
Clarification of ingroup_n and outgroup_n in 'enrichment_comparison' (Fix code)
#39
HarkiratSohi
opened
1 year ago
0
Error from enrichment_method='enrichment_comparison' (Error)
#38
HarkiratSohi
opened
2 years ago
0
Add built-in function/option to generate plots - (Enhancement)
#37
jjacobson95
opened
2 years ago
0
Remove error messages from Vignette within R - (quality of life update)
#36
jjacobson95
opened
2 years ago
0
Fix Enrichment_in_sets - (Bug)
#35
jjacobson95
opened
2 years ago
0
Describe id_column format for enrichment tests - (Documentation)
#34
jjacobson95
opened
2 years ago
0
Describe "comparision_correlation" test - (Documentation)
#33
jjacobson95
opened
2 years ago
0
Primary vs Secondary column update - (Documentation)
#32
jjacobson95
opened
2 years ago
0
Create a Experiment Flowchart - (Documentation)
#31
jjacobson95
opened
2 years ago
0
Build in t-test to Enrichment in Order - (Enhancement)
#30
jjacobson95
opened
2 years ago
0
Enhanced handling of multi-omics results
#29
biodataganache
opened
2 years ago
0
Fixed min_p_threshold in enrichment_in_abundance
#28
muktapalshikar
closed
2 years ago
0
Add n barplot visualization for terms/pathways
#27
sgosline
opened
2 years ago
0
vignette error/warning messages
#26
Itallia
closed
2 years ago
1
Bacterial pathway database
#25
biodataganache
opened
2 years ago
0
Pathway details
#24
biodataganache
opened
3 years ago
0
Empirical p-value calculation
#23
biodataganache
opened
3 years ago
0
updated kinase substrates
#22
sgosline
closed
3 years ago
1
latest trelliscopejs rmd
#21
godi678
closed
2 years ago
0
added rough draft of trelliscopejs function
#20
godi678
closed
3 years ago
0
Documentation not available in Rstudio
#19
biodataganache
closed
3 years ago
0
Cluster_enrichment doesn't work as intended
#18
sgosline
closed
3 years ago
1
Updated vignette, altered arguments to cluster
#17
sgosline
closed
3 years ago
0
Vignette, when built upon install, doesn't include code
#16
sgosline
closed
3 years ago
0
Add multi-omics data to vignette
#15
biodataganache
closed
3 years ago
1
Update vignette to include phosphoproteomics examples
#14
biodataganache
closed
3 years ago
1
Update inline documentation to include phosphoproteomics data
#13
biodataganache
closed
3 years ago
0
attempted fix for README
#12
sgosline
closed
3 years ago
1
Vignette loading not working
#11
biodataganache
closed
3 years ago
1
Update inline documentation for leapR function
#10
biodataganache
closed
3 years ago
1
Sara doc merges
#9
sgosline
closed
3 years ago
0
added data.R
#8
sgosline
closed
3 years ago
0
Update background in manuscript
#7
biodataganache
closed
3 years ago
1
Update manuscript
#6
biodataganache
closed
3 years ago
1
Update inline documentation
#5
sgosline
closed
3 years ago
1
Update vignette to more clearly describe what people can do with data
#4
sgosline
closed
3 years ago
2
Update README to tell people how to install
#3
sgosline
closed
3 years ago
1
Rename wrapper script to leapR
#2
sgosline
closed
3 years ago
1
updated documentation removed excess files
#1
sgosline
closed
3 years ago
0