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popgenmethods
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pyrho
Fast inference of fine-scale recombination rates based on fused-LASSO
MIT License
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whether the pyrho software can output the crossovers per individual #3
#36
ChinJCheung
closed
4 days ago
1
User input (non-human) 'theta' with make_table
#35
Gullumluvl
opened
1 week ago
2
Quick question about LDhelmet vs Pyrho
#34
ericgonzalezs
opened
2 months ago
2
Fatal Python error: Aborted
#33
TakashiKoyama
opened
4 months ago
5
Identical recombination rates in chromosomal plots
#32
jbernst
opened
9 months ago
1
Low recombination rates
#31
JosephLalli
opened
1 year ago
2
Downsampling/thinning maps
#30
JosephLalli
closed
1 year ago
2
ChrX / sex chromosome maps
#29
JosephLalli
closed
1 year ago
2
Mixed population genomic maps
#28
JosephLalli
closed
1 year ago
2
Error when pop sizes are not specified backward in time
#27
jydu
closed
1 year ago
3
Breaking up make_table into multiple files
#26
uqmzhou8
opened
1 year ago
1
Filtering for pyrho
#25
selasphoruskershaw
opened
1 year ago
1
End of HDF5 error back trace
#24
jackzhong1995
closed
1 year ago
3
how to convert pyrho output to cM/Mb
#23
selasphoruskershaw
opened
1 year ago
5
error when run "python -m pytest pyrho/tests/tests.py"
#22
lilei1
closed
2 years ago
3
How to get a genetic map according to pyrho results?
#21
xiekunwhy
closed
3 years ago
2
optimize RuntimeWarning: overflow encountered
#20
jarobin
closed
3 years ago
2
multiple chromosomes, unique SFS or WG?
#19
cistarsa
closed
3 years ago
2
AssertionError while running make_table
#18
AleixPalahi
closed
3 years ago
4
Install ERROR "Building wheel for msprime (setup.py) ... error"
#17
wangnan9394
closed
3 years ago
2
sample size for compute_r2
#16
jarobin
closed
3 years ago
1
How to generate vcf files?
#15
frankchen121212
closed
4 years ago
2
Hyperparam not using threads
#14
lczech
opened
4 years ago
1
Error when setting --logfile
#13
lczech
closed
4 years ago
2
Print to stdout argument
#12
lczech
closed
4 years ago
2
Build error with missing header
#11
lczech
closed
4 years ago
1
Throw warning if lookup table is too small
#10
jeffspence
closed
4 years ago
1
Possible bugs with pyrho
#9
YingZhou001
closed
4 years ago
2
A minor bug in hyperparam
#8
jydu
closed
4 years ago
1
warning deprecation ABC.collections
#7
kullrich
closed
4 years ago
4
Problem with MSMC demography
#6
jydu
closed
4 years ago
7
pytest error from numba
#5
LipengKang
closed
5 years ago
2
Question regarding output
#4
szpiech
closed
5 years ago
2
Crash during hyperparam
#3
szpiech
closed
5 years ago
3
Scipy error in make_table
#2
saurabhbelsare
closed
5 years ago
2
Error while running "make_table"
#1
Shabs86
closed
5 years ago
1