issues
search
popsim-consortium
/
demes-spec
Demes demographic model specification
https://popsim-consortium.github.io/demes-spec-docs/
MIT License
4
stars
4
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
docs: missing software
#165
molpopgen
closed
11 months ago
1
a few small fixes
#164
grahamgower
closed
1 year ago
0
docs: note about string versus boolean values for certain deme names.
#163
grahamgower
opened
1 year ago
2
test cases with demes named `y` are not parsed as strings in yaml v1.1
#162
grahamgower
closed
1 year ago
2
valid test cases with "bad_" prefix in the filename
#161
grahamgower
closed
1 year ago
0
Bump versions for some deps
#160
grahamgower
closed
1 year ago
0
Explain how to get a forward representation of time.
#159
molpopgen
closed
2 years ago
1
Be explicit about how a forwards-time simulator should choose the simulation start time.
#158
grahamgower
closed
2 years ago
1
Building docs on Python 3.10
#157
molpopgen
closed
1 year ago
7
Add example of resolving sequential pulses.
#156
molpopgen
closed
2 years ago
2
Interpretation of multiple "identical" pulses
#155
molpopgen
opened
2 years ago
6
disallow cloning_rate=1 and selfing_rate > 0?
#154
grahamgower
opened
2 years ago
1
Add "how to cite" section to the docs
#153
xin-huang
closed
1 year ago
4
expand table of software in the introduction
#152
grahamgower
opened
2 years ago
0
more specification edits
#151
grahamgower
closed
2 years ago
0
Pulse times
#150
molpopgen
closed
2 years ago
1
Pulse proportions
#149
molpopgen
closed
2 years ago
6
Text for migration time validation.
#148
molpopgen
closed
2 years ago
0
Migration resolution missing a "MUST error" statement
#147
molpopgen
closed
2 years ago
4
edit spec for consistency
#146
grahamgower
opened
2 years ago
0
validation section of spec
#145
grahamgower
closed
2 years ago
4
MDM spec text + cleanups
#144
grahamgower
closed
2 years ago
0
Resolution of pulses in HDM
#143
grahamgower
closed
2 years ago
0
Resolution of migrations in HDM section of spec.
#142
grahamgower
closed
2 years ago
0
Integrate defaults into HDM resolution section.
#141
grahamgower
closed
2 years ago
0
top-level default start_size?
#140
molpopgen
closed
2 years ago
9
More HDM text. How to resolve sizes.
#139
grahamgower
closed
2 years ago
0
Restructure using sectioning
#138
jeromekelleher
closed
2 years ago
0
add stdpopsim catalog to gallery
#137
grahamgower
opened
2 years ago
0
tag a 1.0 beta
#136
grahamgower
closed
2 years ago
6
delete warnings and todos in spec page
#135
grahamgower
opened
2 years ago
0
Update offshoots.resolved.json
#134
apragsdale
closed
2 years ago
2
Description mismatch in offshoots example
#133
apragsdale
closed
2 years ago
0
Potential bad model in valid test cases
#132
apragsdale
closed
2 years ago
8
rename parser.py to avoid conflict with possibly built-in stdlib module
#131
grahamgower
closed
2 years ago
1
test on windows and macos
#130
grahamgower
closed
2 years ago
1
specify the encoding is UTF8
#129
grahamgower
closed
2 years ago
11
Sort pulses
#128
grahamgower
closed
2 years ago
1
pulses must be (stable) sorted in time descending order
#127
grahamgower
closed
2 years ago
2
Ensure generation_time is 1 when time_units are generations
#126
grahamgower
closed
2 years ago
1
when time_units are generations, generation_time must be 1
#125
grahamgower
closed
2 years ago
0
Document selfing/cloning rate fuzziness
#124
jeromekelleher
opened
2 years ago
3
Outline text for resolution
#123
jeromekelleher
closed
2 years ago
1
HDM defaults spec
#122
jeromekelleher
closed
2 years ago
1
Add functionality to compare parsers to the reference implementation
#121
grahamgower
opened
2 years ago
0
More test-cases for pulse sources/proportions.
#120
grahamgower
closed
2 years ago
0
Rename schema files.
#119
grahamgower
closed
2 years ago
0
Rename schemas to schemas/mdm.yaml and schemas/hdm.yaml
#118
jeromekelleher
closed
2 years ago
1
s/deme ID/deme name/
#117
grahamgower
closed
2 years ago
0
Update the migration schema definitions.
#116
grahamgower
closed
2 years ago
0
Next