PyBEL Tools |build| |coverage| |documentation| |zenodo|

PyBEL Tools <https://pybel-tools.readthedocs.io/> is a suite of tools built on top of PyBEL <https://pybel.readthedocs.io> to facilitate data management, integration, and analysis. For examples, see the PyBEL Notebooks <https://github.com/pybel/pybel-notebooks>_ repository.

Citation

If you find PyBEL useful for your work, please consider citing:

.. [1] Hoyt, C. T., et al. (2017). PyBEL: a Computational Framework for Biological Expression Language <https://doi.org/10.1093/bioinformatics/btx660>_. Bioinformatics, 34(December), 1–2.

Installation |pypi_version| |python_versions| |pypi_license|

PyBEL Tools can be installed easily from PyPI_ with the following code in your favorite terminal:

.. code-block:: sh

$ pip install pybel_tools

or from the latest code on GitHub <https://github.com/pybel/pybel-tools>_ with:

.. code-block:: sh

$ pip install git+https://github.com/pybel/pybel-tools.git

See the installation documentation <http://pybel-tools.readthedocs.io/en/stable/installation.html>_ for more advanced instructions.

Documentation and Examples

• Documentation at https://pybel-tools.readthedocs.io
• Cookbook at https://github.com/pybel/pybel-notebooks

Acknowledgements

This package was originally developed as part of the master's work of Charles Tapley Hoyt <https://github.com/cthoyt> at Fraunhofer SCAI <https://www.scai.fraunhofer.de/>.

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