qiime2 q2-deblur issues

qiime2 / q2-deblur

BSD 3-Clause "New" or "Revised" License

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issues

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MAINT: add threads/jobs primitives

#101 colinvwood closed 9 months ago
0
CI: Updates to ci-dev workflow

#100 hagenjp closed 1 year ago
0
ValueError: Decoded Phred score is out of range [0, 62]

#99 linlin-coder closed 1 year ago
1
DEP: pins vsearch to resolve test failure

#98 lizgehret closed 1 year ago
0
CI: add additional tests in commands section

#97 lizgehret closed 1 year ago
0
ci: adding q2_deblur tests

#96 lizgehret closed 2 years ago
0
ci: adding test commands back in

#95 lizgehret closed 2 years ago
1
CI Failing to collect tests?

#94 ChrisKeefe closed 2 years ago
1
ex: Adds usage examples for Hacktoberfest

#93 ChrisKeefe closed 2 years ago
9
dep: rebuild for pandas >=1.2.5

#92 thermokarst closed 2 years ago
0
dep: unpin vsearch

#91 thermokarst closed 2 years ago
0
dep: update click minpin

#90 thermokarst closed 2 years ago
0
dep: pin pandas

#89 thermokarst closed 2 years ago
0
ci: update recipe

#88 thermokarst closed 3 years ago
0
ci: library integration

#87 thermokarst closed 3 years ago
0
dep/bug: deblur doesn't work with click 8

#86 thermokarst closed 3 years ago
7
new: python 3.8

#85 thermokarst closed 3 years ago
0
maint: deprecations, file cleanup, nose->pytest

#84 Keegan-Evans closed 3 years ago
2
BUG/REGRESSION: Fix faulty underscore checking

#83 thermokarst closed 4 years ago
3
MAINT: Remove Flask license

#81 emford closed 5 years ago
0
BUG: Raise error when underscore in sample id

#80 Oddant1 closed 5 years ago
0
BUG: Fix #70 using @wasade's suggestion in the comments on the issue.

#79 Oddant1 closed 5 years ago
1
ENH: Adds `left_trim_len` parameter

#78 thermokarst closed 5 years ago
2
MAINT: Travis, bump to python 3.6

#77 thermokarst closed 5 years ago
0
MAINT: Updates for python 3.6

#76 thermokarst closed 5 years ago
0
MAINT: Updating copyright headers for 2019

#75 ChrisKeefe closed 5 years ago
0
Updating numpy and scipy dependencies

#74 mortonjt closed 5 years ago
5
Update for flake8 v3.6

#73 ChrisKeefe closed 6 years ago
0
Qiime 2: killed :9

#72 vivizyx closed 6 years ago
1
A ValueError is missing string formatting

#71 wasade closed 5 years ago
1
--p-sample-stats fails to correctly parse sequence identifiers with a semicolon

#70 wasade closed 5 years ago
1
HACK: pin vsearch 2.7.0

#69 ebolyen closed 6 years ago
0
Update to latest scipy

#68 ebolyen closed 5 years ago
3
Underscores in sample IDs breaks the pipeline

#67 thermokarst closed 5 years ago
1
MAINT: Pinning scipy (on behalf of deblur)

#66 thermokarst closed 6 years ago
0
BUG: Typo in numpy version pin

#65 thermokarst closed 6 years ago
0
MAINT: Version pinning numpy;fixes for pandas 0.23

#64 thermokarst closed 6 years ago
0
numpy 1.14.3 and scipy 1.1.0 break denoise-*

#63 thermokarst closed 6 years ago
3
ENH: add citations

#62 nbokulich closed 6 years ago
2
Add citations

#61 ebolyen closed 6 years ago
0
Bump minimum version req

#60 wasade closed 6 years ago
6
Add support for SampleData[Sequences]

#59 wasade opened 6 years ago
8
new release 1.0.4

#58 sjanssen2 closed 6 years ago
3
Track number of trimmed reads, and number dropped due to trimming in stats

#57 wasade opened 6 years ago
0
MAINT: update copyright year; travis

#56 ebolyen closed 6 years ago
0
support viewing of `DeblurStats` type with `qiime metadata tabulate`

#55 gregcaporaso opened 6 years ago
0
Optionally suppress logfile?

#54 jakereps opened 7 years ago
0
ENH: adds support for JoinedSequencesWithQuality

#53 gregcaporaso closed 7 years ago
0
support `SampleData[JoinedSequencesWithQuality]` as input

#52 gregcaporaso closed 7 years ago
0