issues
search
rigdenlab
/
conkit
Contact Prediction ToolKit
https://www.conkit.org/en/latest/
BSD 3-Clause "New" or "Revised" License
20
stars
8
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Fix documentation
#116
FilomenoSanchez
closed
2 years ago
0
Images are missing on the documentation website
#115
tubiana
closed
2 years ago
2
core.contactmap match and match_naive functions now match_other=True …
#114
jjavier-bm
opened
2 years ago
1
match_naive counts FNs wrongly when match_other = True
#113
jjavier-bm
closed
2 years ago
1
Update docs and revision version increase
#112
FilomenoSanchez
closed
2 years ago
0
Update requirements for CCP4
#111
FilomenoSanchez
closed
2 years ago
0
Update requirements for CCP4
#110
FilomenoSanchez
closed
2 years ago
0
Update ContactMap.match() and add naive method
#109
FilomenoSanchez
closed
2 years ago
2
Structure maps with 0 contacts make the match function crash
#108
jjavier-bm
closed
2 years ago
2
Basic maintenance
#107
FilomenoSanchez
closed
2 years ago
0
Setup thresholds in conkit-validate
#106
FilomenoSanchez
opened
2 years ago
0
MIssing files in pip package
#105
FilomenoSanchez
closed
2 years ago
0
Pip install fix
#104
FilomenoSanchez
closed
2 years ago
0
Version update
#103
FilomenoSanchez
closed
2 years ago
2
Minor bug fixes
#102
FilomenoSanchez
closed
2 years ago
1
Conkit-precision should be able to compare two contact maps if a contact map is provided instead of a PDB file.
#101
sadiogo
closed
2 years ago
10
TypeError: Python3 requires f_handle to be in 'wb' or 'ab' mode
#100
FilomenoSanchez
closed
2 years ago
1
Set PDB sequence register at conkit-plot peval and conkit-precision
#99
FilomenoSanchez
closed
2 years ago
0
FASTA conversion into A3M should be gapless
#98
FilomenoSanchez
opened
2 years ago
1
Graceful exit when set sequence register fails
#97
FilomenoSanchez
closed
2 years ago
0
conkit-plot peval fails to match sequences
#96
sadiogo
closed
2 years ago
50
AmiseBW for non-int data
#95
darrencl
closed
2 years ago
2
Ensure missing residues are ignored when calculating Zscores
#94
FilomenoSanchez
closed
2 years ago
0
NaN values in conkit-validate table
#93
FilomenoSanchez
closed
2 years ago
0
Fix conkit-plot cmap
#92
FilomenoSanchez
closed
2 years ago
0
Contact map superposition shows all contacts in PDB
#91
FilomenoSanchez
closed
2 years ago
0
Update conkit-validate to use SVM classifier
#90
FilomenoSanchez
closed
2 years ago
0
Update github actions to fix codecov
#89
FilomenoSanchez
closed
2 years ago
0
fix typo Valencian -> English
#88
jjavier-bm
closed
2 years ago
0
Bug fix
#87
FilomenoSanchez
closed
2 years ago
0
Error when ploting distance predictions
#86
FilomenoSanchez
closed
2 years ago
1
'Sequence' object has no attribute 'sequence'
#85
FilomenoSanchez
closed
2 years ago
1
Added conkit-validate to the command line
#84
FilomenoSanchez
closed
2 years ago
0
Add distance plots to conkit.plot
#83
FilomenoSanchez
closed
3 years ago
0
Support for distance predictions
#82
FilomenoSanchez
closed
3 years ago
2
can we convert casp rr format to pdb format file?
#81
kjing
closed
3 years ago
3
CI build fix
#80
fsimkovic
closed
4 years ago
0
chore: update README
#79
fsimkovic
closed
4 years ago
0
Fix docs
#78
fsimkovic
closed
4 years ago
0
New functionality conkit-plot plus
#77
FilomenoSanchez
closed
4 years ago
0
Added python version to dependency - requested by Charles
#76
hlasimpk
closed
4 years ago
0
added invert_match optional arg in core.contactmap.find
#75
jjavier-bm
closed
4 years ago
3
remove version deps and fix setup
#74
fsimkovic
closed
4 years ago
1
remove support for Python2.7
#73
fsimkovic
closed
4 years ago
1
Define a minimum residue window of 10 for plotting small contact maps
#72
fsimkovic
closed
4 years ago
0
Unable to plot small Contact Maps
#71
jjavier-bm
closed
4 years ago
1
Basic maintenance
#70
fsimkovic
closed
4 years ago
1
Setup for GitHub Actions Workflow
#69
fsimkovic
closed
4 years ago
1
Added new format and some new methods to contactmap class
#68
FilomenoSanchez
closed
4 years ago
0
Added map_align format parser
#67
FilomenoSanchez
closed
5 years ago
1
Next