robinandeer puzzle issues

robinandeer / puzzle

Variant caller GUI + genetic disease analysis

https://robinandeer.gitbooks.io/puzzle/content/

MIT License

22 stars 7 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Bump jquery from 2.2.4 to 3.5.0

#233 dependabot[bot] opened 4 years ago
0
Bump jquery from 2.2.4 to 3.4.1

#232 dependabot[bot] closed 4 years ago
1
Incompatible usage of GeminiPlugin

#231 DamianSkrzypczak opened 6 years ago
0
path

#230 colindaven opened 7 years ago
1
Puzzle crashed while visualising large CNV

#229 johsko opened 8 years ago
0
gemini plugin

#228 ramaniak opened 8 years ago
2
File "cyvcf2/cyvcf2.pyx", line 155, in cyvcf2.cyvcf2.VCF.__init__ (cyvcf2/cyvcf2.c:7106) TypeError: Expected bytes, got path

#227 J35P312 closed 8 years ago
6
rely on MANIFEST.ini

#226 robinandeer closed 8 years ago
4
Create a proper test gemini database

#225 moonso opened 8 years ago
1
Filter fix w test rebase

#224 dnil closed 8 years ago
1
Added inheritance filter to gemini plugin

#223 moonso opened 8 years ago
10
Don't open browser if --no-browser is True

#222 guillermo-carrasco closed 8 years ago
2
enable storing queries

#221 robinandeer closed 8 years ago
3
Fix vcf gene filter

#220 dnil closed 8 years ago
4
Add ExAC frequencies also in vcf adapter

#219 dnil closed 8 years ago
2
Upload range file

#218 moonso opened 8 years ago
0
Frequency filter stopped working?

#217 dnil closed 8 years ago
8
Enable uploading of regions in bed format

#216 moonso opened 8 years ago
0
Fix vcf no ind

#215 moonso closed 8 years ago
2
Gene list searching appears to default to wildcard

#214 dnil closed 8 years ago
1
Allow analysis on multiple individuals from different cases

#213 moonso closed 8 years ago
3
Virtual cases

#212 robinandeer closed 8 years ago
5
Add annotations

#211 moonso opened 8 years ago
4
Add OMIM phenotype inheritance model and link to phenotype

#210 henrikstranneheim closed 8 years ago
0
Add annotation for region under evolutionary contraint

#209 henrikstranneheim closed 8 years ago
0
Add CLNSIG field in Summary table

#208 henrikstranneheim closed 8 years ago
0
fix #123

#207 moonso closed 8 years ago
1
added cython to the list

#206 J35P312 closed 8 years ago
3
add gitbook

#205 robinandeer closed 8 years ago
3
Migration of comments, HPO, gene lists, pinned variants etc when updating puzzle (via CLI)

#204 henrikstranneheim opened 8 years ago
0
Show some feedback when loading variants

#203 guillermo-carrasco opened 8 years ago
1
Make executable app

#202 robinandeer opened 8 years ago
0
add pinning support!!!!!!!

#201 robinandeer closed 8 years ago
2
Show filter results

#200 moonso closed 8 years ago
13
Indicate which variants have comments in the variants listing page

#199 vasiliosz opened 8 years ago
1
add and test synopsis func. fix #195

#198 robinandeer closed 8 years ago
3
Impact severities gemini

#197 moonso closed 8 years ago
1
impact_severity filter is not working as suspected

#196 moonso closed 8 years ago
1
Synopsis

#195 moonso closed 8 years ago
0
Comments

#194 moonso closed 8 years ago
0
Range filter

#193 moonso closed 8 years ago
2
Query on range

#192 moonso closed 8 years ago
0
Add support for "pinning" a variant

#191 henrikstranneheim closed 8 years ago
1
Add aa pos gemini

#190 moonso closed 8 years ago
1
fix #96

#189 moonso closed 8 years ago
0
KeyError raised when cyvcf2 loads FindSV vcfs

#188 dnil closed 8 years ago
3
Rerebase filter fix

#187 dnil closed 8 years ago
2
Guess file type

#186 moonso closed 8 years ago
2
Add EXACAF as key name to display Exac frequency

#185 henrikstranneheim closed 8 years ago
1
External links

#184 henrikstranneheim opened 8 years ago
2