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robinweide
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GENOVA
GENome Organisation Visual Analytics
GNU General Public License v3.0
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saddle - Error in findInterval(eval(i), stats::quantile(eval(i), qbins, na.rm = TRUE)
#263
YiweiNiu
closed
3 years ago
4
compartment_score - Error in if (any(newwidths > 2 * widths)) { : missing value where TRUE/FALSE needed
#262
YiweiNiu
closed
3 years ago
7
Unable to compare compartment_score with .hic files loaded
#261
bharaths24
opened
3 years ago
3
Adjustable Color bar in hic_matrixplot
#260
KunFang93
closed
3 years ago
7
How to install the strawr R package?
#259
mdozmorov
closed
3 years ago
1
hiç matrix colors
#258
KunFang93
closed
3 years ago
3
Update vignette with test data
#257
teunbrand
closed
3 years ago
0
Add commas to remotes
#256
teunbrand
closed
3 years ago
0
Continuous Integration
#255
teunbrand
opened
3 years ago
3
Compare contacts between two regions
#254
chenggang108
closed
2 years ago
5
rtracklayer for bigwig tracks (#252, #118, #194(comment), #228)
#253
teunbrand
closed
3 years ago
0
Using rtracklayer for tracks
#252
robinweide
closed
3 years ago
8
Fix bug in insulation score visualise (#246)
#251
teunbrand
closed
3 years ago
0
A few bugfixes
#250
teunbrand
closed
3 years ago
0
Error in loading mcool files and visualize compatment
#249
chenggang108
closed
3 years ago
5
Error in compartment_score()
#248
skelviper
closed
3 years ago
2
Fixes #241 and fixes #246
#247
teunbrand
closed
3 years ago
0
Insulation score calculation with more than 3 HiC matrices
#246
meisterpeter
closed
3 years ago
10
add vignette
#245
robinweide
closed
3 years ago
0
Dev
#244
robinweide
closed
3 years ago
0
"all" option for compartment_matrix and citation info
#243
teunbrand
closed
3 years ago
0
Cooler balancing creates issue with insulation-score [needs reprex]
#242
robinweide
closed
3 years ago
9
Holocentric centromere support
#241
meisterpeter
closed
3 years ago
4
Error with load_contacts()
#240
skelviper
closed
3 years ago
9
Squash a few bugs and purge deprecated files
#239
teunbrand
closed
3 years ago
0
Test data function and cache
#238
teunbrand
closed
3 years ago
1
Fix rasterise = TRUE bug and separate log2obsexp from obsexp option in compartment_matrix
#237
teunbrand
closed
3 years ago
0
Dev
#236
robinweide
closed
3 years ago
0
Vignette update
#235
teunbrand
closed
3 years ago
0
StrawR-compability
#234
robinweide
closed
3 years ago
1
Labels in visualise
#233
MarijneMia
opened
3 years ago
2
Support whole Chromosome for trans.compartment.plot
#232
QianzhaoJ
closed
3 years ago
2
Generate O/E normalised matrix
#231
QianzhaoJ
closed
4 years ago
2
Saddle samplenames order
#230
teunbrand
closed
3 years ago
1
Saddle plot for trans-interactions
#229
QianzhaoJ
closed
4 years ago
2
install error
#228
QianzhaoJ
closed
4 years ago
2
Fix 2 bugs
#227
teunbrand
closed
4 years ago
0
.hic loading bug
#226
teunbrand
closed
4 years ago
1
Error in "load_contacts" for juicer .hic file.
#225
hiroyukikato911
closed
2 years ago
25
Fork submission-version as V1 to dewitlab
#224
robinweide
closed
2 years ago
2
Fix #171
#223
teunbrand
closed
4 years ago
0
Tying up some loose ends
#222
teunbrand
closed
4 years ago
0
New matrixplot functions
#221
teunbrand
closed
4 years ago
0
Quantify methods
#220
teunbrand
closed
4 years ago
0
Feature request: rasterised HiC matrixplot
#219
teunbrand
closed
4 years ago
1
Standardise location input
#218
teunbrand
closed
4 years ago
2
Annotated plotting updates
#217
teunbrand
closed
4 years ago
1
Compartment score signing using reference compartment scores
#216
teunbrand
closed
4 years ago
2
Hotfix
#215
teunbrand
closed
4 years ago
1
add_tads is not using chromosome-information
#214
robinweide
closed
4 years ago
1
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