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rust-bio
/
rust-bio-tools
A set of command line utilities based on Rust-Bio.
MIT License
182
stars
24
forks
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build(deps): update uuid requirement from 0.7 to 1.9
#267
dependabot[bot]
opened
4 months ago
0
build(deps): update rand requirement from 0.7.3 to 0.8.5
#266
dependabot[bot]
opened
6 months ago
0
build(deps): update uuid requirement from 0.7 to 1.8
#265
dependabot[bot]
closed
4 months ago
1
build(deps): update itertools requirement from 0.9 to 0.12
#264
dependabot[bot]
closed
6 months ago
0
build(deps): update lz-str requirement from 0.1.0 to 0.2.1
#263
dependabot[bot]
opened
6 months ago
0
build(deps): update derive-new requirement from 0.5 to 0.6
#262
dependabot[bot]
opened
6 months ago
0
build(deps): update rand_core requirement from 0.5.1 to 0.6.4
#261
dependabot[bot]
opened
6 months ago
0
chore: release 0.42.2
#260
github-actions[bot]
closed
6 months ago
1
build: Update rust-htslib to 0.46.0 and GSL to 7.0.0 for Linux ARM64 compatibility
#259
martin-g
closed
6 months ago
9
chore: Setup dependabot
#258
fxwiegand
closed
6 months ago
0
build: Update xlsxwriter due to compilation error with older version
#257
fxwiegand
closed
1 year ago
1
xlsxwriter v0.3.5 compiling failed
#256
adrianodemarino
closed
1 year ago
7
chore: release 0.42.1
#255
github-actions[bot]
closed
6 months ago
1
rbt does not support gzipped file?
#254
sharkLoc
opened
1 year ago
0
rbt fastq-filter runs forever on empty ids file
#253
Ulthran
opened
1 year ago
0
fix: consensus reads: correct handling of read orientation
#252
FelixMoelder
closed
1 year ago
1
chore: release 0.42.0
#251
github-actions[bot]
closed
1 year ago
1
feat: consensus reads - move record ids to description field
#250
FelixMoelder
closed
1 year ago
1
feat: reformat fastq header
#249
FelixMoelder
closed
1 year ago
0
chore: release 0.41.0
#248
github-actions[bot]
closed
2 years ago
1
feat: Remove duplicate marks from consensus records
#247
FelixMoelder
closed
2 years ago
0
chore: release 0.40.0
#246
github-actions[bot]
closed
2 years ago
1
chore: release 0.39.1
#245
github-actions[bot]
closed
2 years ago
1
fix: vcfsplit BND record ordering
#244
tedil
closed
2 years ago
0
fix: Improved message if error occurred during FORMAT parsing in vcf-to-txt
#243
essut
closed
2 years ago
0
feat: Enable printing FILTER field for vcf-to-txt
#242
essut
closed
2 years ago
0
fix: Handle empty sequences for bam-anonymize
#241
FelixMoelder
closed
2 years ago
0
bam-anonymize may require soft clipping for supplementary alignments
#240
jelber2
closed
2 years ago
3
chore: release 0.39.0
#239
github-actions[bot]
closed
2 years ago
1
feat: Make annotation header available for customized reports
#238
fxwiegand
closed
2 years ago
0
chore: release 0.38.3
#237
github-actions[bot]
closed
2 years ago
1
fix: Fix vcf-report allele frequency heatmap width
#236
fxwiegand
closed
2 years ago
0
fix: Fix vcf-report read plot height when using --max-read-depth
#235
fxwiegand
closed
2 years ago
0
chore: release 0.38.2
#234
github-actions[bot]
closed
2 years ago
1
fix: add popper in csv report
#233
thomasbtf
closed
2 years ago
0
chore: release 0.38.1
#232
github-actions[bot]
closed
2 years ago
1
fix: Report 1-based position in vcf-report log messages
#231
fxwiegand
closed
2 years ago
1
[vcf-report] 0-based position reporting for 1-based VCF file
#230
hassanfa
closed
2 years ago
4
vcf-split breaks sorting
#229
fgvieira
closed
2 years ago
2
chore: release 0.38.0
#228
github-actions[bot]
closed
2 years ago
1
fix: Apply latest clippy lints
#227
fxwiegand
closed
2 years ago
0
feat: Add aux field to tooltip
#226
fxwiegand
closed
2 years ago
0
chore: release 0.37.0
#225
github-actions[bot]
closed
2 years ago
1
feat: Use Feature before HGVSg for vcf-report level 1 naming
#224
fxwiegand
closed
2 years ago
0
chore: release 0.36.0
#223
github-actions[bot]
closed
2 years ago
1
chore: release 0.35.1
#222
github-actions[bot]
closed
2 years ago
0
fix: Fix possible broken link to third stage of vcf-report
#221
fxwiegand
closed
2 years ago
0
feat: Warn instead of panic for missing HGVSg values in vcf-report
#220
fxwiegand
closed
2 years ago
0
feat: anonymize bam - adapt mandatory and aux fields
#219
FelixMoelder
closed
2 years ago
1
chore: release 0.35.0
#218
github-actions[bot]
closed
2 years ago
1
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