ryanlayer giggle issues

ryanlayer / giggle

Interval data structure

MIT License

224 stars 29 forks source link

issues

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make error

#69 rysterzhu closed 10 months ago
2
Missing config. files?

#68 KarlSemaan closed 10 months ago
9
update readme with metadata

#67 sspathare97 closed 1 year ago
0
Add metadata index and query filter

#66 sspathare97 closed 1 year ago
0
Compiling issue

#65 kearseya closed 10 months ago
3
Index multiple VCF files

#64 bio-bench opened 2 years ago
9
giggle: Could not open human_hm_sort/3651_sort_peaks.narrowPeak.bed.gz.

#63 MenglinC closed 2 months ago
3
giggle_index.h redefinition of "leaf_data_cache_handler"

#62 mchowdh200 opened 2 years ago
0
Cache compression with header

#61 sspathare97 closed 2 years ago
0
the append function is not defined

#60 fizwit opened 2 years ago
0
added zlib compression

#59 sspathare97 closed 2 years ago
0
Create LICENSE

#58 ryanlayer closed 3 years ago
0
Segfault for Negative Interval Bounds

#57 sky123martin opened 3 years ago
0
Segfault when trying to index

#56 amathelier opened 4 years ago
2
Interactive heatmap not working

#55 retrogenomics opened 4 years ago
0
Update README.md

#54 HugoGuillen closed 4 years ago
0
GIGGLE on Singularity

#53 HugoGuillen closed 4 years ago
2
Segmentation fault

#52 kopardev opened 4 years ago
1
extra (false positive) overlaps issue

#51 pkuksa opened 4 years ago
0
Feature request: bioconda recipe

#50 mjsteinbaugh opened 4 years ago
5
Add colored output to the unit test runs

#49 javaidm closed 5 years ago
0
fix the bug that fails the unit test test_giggle_bulk_insert

#48 javaidm closed 5 years ago
0
Unit test failing

#47 ignaciot opened 5 years ago
0
GIGGLE combo score 0 for highly overlapping files containing broad intervals

#46 angibekesi opened 5 years ago
0
Feature request - custom background

#45 pfsulliv opened 5 years ago
0
Feature request - permutation testing

#44 pfsulliv opened 5 years ago
0
Feature request - Jaccard index

#43 pfsulliv opened 5 years ago
0
Feature request - bed file header read/write/bulk retrieve

#42 pfsulliv opened 5 years ago
1
example doesn't work

#41 jkanche opened 5 years ago
4
Installation Error

#40 harinipras opened 5 years ago
0
Better error message when too many files are open

#39 ryanlayer opened 5 years ago
0
Incorrect result for edge case where there are more overlaps than db regions

#38 auberginekenobi opened 5 years ago
0
Install fails tests (Ubuntu subsystem in Windows)

#37 auberginekenobi opened 6 years ago
0
License and tagged release?

#36 tomkinsc opened 6 years ago
0
Problem indexing multiple bed files

#35 mvdbeek closed 6 years ago
2
Unable to sort inout file

#34 dhwani2410 closed 6 years ago
1
Update README.md

#33 arq5x closed 6 years ago
0
don't return incorrect result silently on unsorted data

#32 brentp opened 6 years ago
0
Add Docker environment instruction.

#31 kubor closed 6 years ago
1
Completion of error handling

#30 elfring opened 6 years ago
0
Improve const-correctness

#29 elfring opened 6 years ago
0
reserved identifier violation

#28 elfring opened 6 years ago
0
some typos and table rendering

#27 pdiakumis closed 6 years ago
0
Take stdin as input for -q

#26 mvelinder opened 7 years ago
0
Can't run outside of directory

#25 mvelinder opened 7 years ago
0
gargs command?

#24 HGENETIC closed 7 years ago
17
toolshed rename.py error

#23 HGENETIC closed 7 years ago
2
Availability of test data

#22 retrogenomics closed 7 years ago
2
install errors

#21 retrogenomics closed 7 years ago
6
examples for plotting utilities in scripts folder

#20 avilella closed 7 years ago
1