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saketkc
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gencode_regions
Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files
BSD 2-Clause "Simplified" License
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gencode 30 and ensembl 97 gtf/gff3 not working
#13
zyh4482
closed
2 years ago
2
Promoters?
#12
c2b2pss
closed
2 years ago
1
Gsoc2021 gtfbase
#11
tanishq67
opened
3 years ago
0
the position of first intron
#10
sixone11
opened
3 years ago
1
tested pyensembl to download gtf file of dog to generate bed files
#9
anamika-yadav99
opened
3 years ago
1
Bed file for Felis_Catus9.0
#8
anamika-yadav99
closed
3 years ago
1
Updated README.md
#7
tanishq67
closed
3 years ago
1
Issues faced while trying to run notebooks
#6
tanishq67
closed
3 years ago
2
can not execute gtfToGenePred
#5
qicaibiology
closed
4 years ago
15
Avoid using scientific notation
#4
bug1303
closed
4 years ago
1
In your R script (create_regions_from_gencode.R) there is a small bug
#3
Alex-Nesta
opened
5 years ago
5
Not working with gencode.mm10.vM14.annotation.gtf / gff3
#2
AMChalkie
closed
7 years ago
1
extra information on the regions
#1
asifzubair
closed
7 years ago
4