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sanger-pathogens
/
pymummer
Python3 module for running MUMmer and reading the output
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11
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What does the "[IDENTITY]" tag means ?
#38
lalalagartija
opened
10 months ago
0
install failure,what should i do?
#37
wlh1234
opened
1 year ago
1
allow the user to specify temp dir or use the system default
#36
rpetit3
opened
2 years ago
0
Python 3 pip installation failing
#35
zmunro
opened
3 years ago
1
Add Python Versions and Power Support ppc64le
#34
nagesh4193
closed
3 years ago
2
docs clarification: (1) support for mummer4 (2) support for promer
#33
notestaff
opened
4 years ago
1
Store reverse or not in Variant class
#32
martinghunt
closed
5 years ago
0
Store variant strand
#31
martinghunt
closed
5 years ago
0
Added changelog
#30
ssjunnebo
closed
5 years ago
0
update README
#29
ssjunnebo
closed
5 years ago
0
Add diagfactor (-d) and maxgap (-g) options for nucmer
#28
Adamtaranto
closed
7 years ago
0
update LICENSE
#27
ssjunnebo
closed
7 years ago
0
Ref qry translate vars not in matches
#26
martinghunt
closed
7 years ago
0
Indels bug
#25
martinghunt
closed
7 years ago
0
Show snps expose C option
#24
martinghunt
closed
7 years ago
0
Expose mincluster
#23
martinghunt
closed
7 years ago
0
Ref coords from qry coord
#22
martinghunt
closed
8 years ago
0
MUMmer programs not found in path
#21
mthang
closed
7 years ago
4
Make __version__ work
#20
martinghunt
closed
8 years ago
0
Coords finding in matches
#19
martinghunt
closed
8 years ago
0
Remove numpy dependency
#18
martinghunt
closed
8 years ago
0
Convert to mspcrunch
#17
martinghunt
closed
8 years ago
0
Msp crunch output
#16
martinghunt
closed
8 years ago
0
Add TravisCI support
#15
bewt85
closed
9 years ago
0
Expose diagdiff to nucmer
#14
martinghunt
closed
9 years ago
0
Reverse alignments
#13
martinghunt
closed
9 years ago
0
Fix constructing alignment from promer output
#12
martinghunt
closed
9 years ago
0
Add promer option; version bump
#11
martinghunt
closed
9 years ago
0
minor version number incremented
#10
nds
closed
9 years ago
0
Added --nosimplify toggle to nucmer command
#9
nds
closed
9 years ago
0
Change to pyfastaq; add to pypi
#8
martinghunt
closed
9 years ago
0
put system call code in seprate module
#7
martinghunt
closed
9 years ago
0
Add snp_file to list of modules
#6
martinghunt
closed
9 years ago
0
Added documentation in README file
#5
nds
closed
9 years ago
0
Add variant calling
#4
martinghunt
closed
9 years ago
0
Added some doc lines
#3
nds
closed
9 years ago
0
Split into separate files
#2
martinghunt
closed
9 years ago
0
Initial commit
#1
martinghunt
closed
9 years ago
0